| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0299 |
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| Symbol | |
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| ID | 3723347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 376807 |
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| End bp | 380526 |
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| Gene Length | 3720 bp |
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| Protein Length | 1239 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637749879 |
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| Product | two component sensor histidine kinase |
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| Protein accession | YP_355729 |
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| Protein GI | 77917914 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.669336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAA GGCGGTGGCA AAAAATGTAT CTGATCCTTG AAGGAGAAGA TCAGGATCCA
AAGGCTTTGC AGCAGCTGCT GAAGGATCAC GGGTACACGG TTTCGCTGCG AAGCGGTGCC
GGCCCGGAGG CAGCCGCCAG GACCGAAACG GCCGAGGAAA ACCTGCCGCT GGCGTTTCTG
GCTCATTTCA TCGATGGCAT CATCGTCGTG GATGTCGAAA CCGTGGGGGT GAAGTACGCC
AATAAGGCTT TTGCCGACAT GCTTGGATAC AGTCTGGAAG AAGTTCATCG GCATAAGGTC
TGGGACTGGG ATGCCGTCTG GTCGCGGGAA GAAATCGAAG AGATGTCTGC GACGCGGAAC
TGGCCGGGGG AACATTTCGA GACCCGCCTT CGGTGCAAGG ACGGACGGGT GCTGGATGTG
GCCATCAGCC ATAAGCCGAT CTTCTGGCAG GGAGCGGAGC TCGTCTTGTG TGTGATCGAG
GATATCACTG AGCGCAAGCG AACCGAGCGC GTGCTGCATC TCACGCAATT CACCGTGGAA
AAAACCGATG ATCAGGCCTT TTGGATGGAT CCCGAGGGGC GGTTTCTCTA CGTCAACGAA
GCAGCCTGTA CCGCTTTGGG TTACAGCCGG GAAGAACTCG AAGGCATGCC GATATGGGAA
GTCGATCCGA ATGTTACCCG GGAAAACGCT GTCGATTATT GGCTGCGATT GAAAGAACAA
GGCTCGATGC GTTTCGAAAG CCTGCACCGG GCCAAAGATG GACGTATCTA CCCGGTGGAG
GTTCGCGGAA ATTACGTTAA TTATGACGGC AGGGAATACA GTTGTGTCTT TGTCACGGAT
CTCAGCGAAC GCCGGCAGGC GGAACAGCAA TTGCGGCAAG CCAATCTTGT GCTGGAGAGC
AGTCCGGCGG TTTTGTACCG CCGCAAAGCA CAGCCGGGAT GGCCGTTGGA AATGGTCACG
AGGAACGTTG CCTGTTTCGG ATATGCCCCC AACGAACTTT TGTCCGGGGC TGTTTCTTTC
GCGGACCTGG TTCATCCGGA GGATCTCGAC CGGGTGGCTG CCGAGGGAAC GGAATATACC
CTCCAGGGTG AAGACCGCTT TCAGCAGGAA TATCGGATCG TCACCAGGGG GGGGGATGTC
CGCTGGGTCG ATGACCGTAC CGTTGCCGAA CGGGATGGGC AAGGGAGGGT GACCCACTAT
CAGGGCATCG TTCTGGACAT CACCGACCGC AAACGGACCG AACTCGTCAT GGCGGCGCGC
ATGCGCCTGA TTCAGTTCGC TGCTACGCAC ACCCTGGACG AACTGCTGGA AGCCACCCTG
GACGAGGCGG AAGATCTGAC CGACAGCCAG ATCGGTTTTT TTGTGTTTCT CGATGCCGAT
CAGAAAACCC TCTCCATGCA GAACTGGTCC ACCAGGACCA AGCGGGATTT CTGTACGGCG
CAAGGCAAAG GGCTGCACTA TCCGGTATCG CAGGCCGGGG TATGGGCCGA CTGTATTCAC
CAGCGTCGGC CGGTTATTCA CAACGACTAT GCCGCTCTTC TCCACCGTAA GGGGCTGCCG
CCAGGGCACT CTCCACTGAT GCGGGAACTG GTCGTGCCGG TCTTCCGCGG CGAGAACATT
ATGGCCGTCG TTGCGGTGGG TAACAAGTCG CAGACCTACA CGCCGCAGGA CGTGGAAGCG
GTTTCTCTTT TGGCCGATCT CGCCTGGACG ATTGCCGAGA GCAAGAAGGC CGAGGAAGCC
TTGGAAAACC GCCTGGTCGC TTTGACCCGC CCGTTGGAGG ATGCTGCCGG CGTCACCTTC
GAGGAGTTAT TCAATCTGTC AGACATCCAG CGTCTGCAGG ATGATTTCGC CCAGGCCACC
GGCGTGGCGT CTCTTATCAC CCTTCCGGAC GGTACGCCCC TCACCGAGCC CAGTAACTTC
TGCCGCTTCT GCACAATGAT CCGGGCGACG GAAAAAGGGG CCGTCAATTG TATAAAATCC
GACGCAGTAC TGGGCAGACC TTCAGCCTTG GGTTCGACTG TGCGGAAATG CTTGAGCGGA
GGGCTTTGGG GGGCTGGCGC CGCCATCCTG GTCGGGGGGC GTCATATTGC CAGTTGGCTT
ATCGGCCAGG TGCGAGACGC GAATGTGACC GAAGAACAGG TACGTGCCTG CGTTCGAAAA
ACAGGTGTCG ATGAAGAGGC CGTGTTGGAG GCCTTCCGTG AAATTCCGGT CATGCCCCGT
GAGCGCTTCG GCCAGGTCGC CCAGGCGTTG AATACGCTGG CCGGGCAACT TTCCTCCATC
GCTTACCAGA ATGTGCAGCA GGCCCGTTTC ATCACCGATT ACAAACAGGC CGAAGAAGCG
CGCCGCAAGT CCGAGAGCGA GTATAAATCG ATAGTCGAGC ATGCCCCCTT CGGCATCACC
CGTTCCACCC GGGAGGGCAA ACTGCTCAGT GTCAATCCGG CGCTCGCCTC CATTCTGAAA
TACGATTCGG TGCAGGAGTT GATGGAGACC GTCAACCGTT CCAGCATTCA GGAGGTGCTT
TTCCCCAAAC CTGAGGAGCG GGATGCCCTG GTGGATAAAG TCCTCACGCA GGATGCCTGG
TATGTCTTCA ACAACCGGTT ACGCTGTAAG GATGGCAGTA TCGTAACCTG CCGGGTCCAT
TCCCGGCGGA TCGCCGATGA GGGCGGTCTG ATCGGTGAAT TCGAAAGTTT TCAGGAGAAC
ATCACCGATC AATTGGCTGC GCAAGAGGCG CTGCGGGAGA GCGAGGAGAA GTTTCGCGTG
CTGGCGGAGA CCTCGCCGGT GGCGATCTGC CTCTATCAGG AGGATCGGCA CATCTATGCC
AATCCCGCCA TGGAGCGGCT ATTCGGTTAC GACGCCGACA CGTTGTGCAA CATGAACATC
TGGGATATAG GCCACGAAGA TTCCCGGGAC CTGATTCGGG AGCGGGGGCT TGCCCGGCTG
GCGGGACAAA GTGTATCCGG TCAGTATGAA ATCAAATACC TGACCAAGGC TGGTGGTGAG
GGGTATGTGC TGATTTCAGC CGGGTTGATC GAATACCAGG GCCGTCCTAC CGGGGTGGCG
TCGTTTCTCG ATATAACCGA GCGCAAACGG ACCGAACAGC TGATCCGGGC GTCCCTGAAG
GAGAAGGACG TGTTGTTGCG GGAGATCCAT CACCGGGTCA AGAACAACCT GCAGGTGGTG
TCGAGCCTGC TGTATCTGCA GTCACAGAAG TTCAGTGATG CGGAGCTGCA GAACTGCTTT
CTGGAAAGCC AGAGTCGCAT CTGTTCCATG GCCATAGCCC ATGAGCAGCT TTACCAGTCC
AAGAACCTGG CGGACATCAG CATCAAGACC TATCTGGAGA ACCTGGTGCA GCAACAGCAA
CAGATCCTTT TCTCTCCCGG CCAGCAGATC GATTGCCGGC TGACGGTCGA GGATATCCCC
CTCGATATCG AAAAGGTGGT TCCCTGCGGC CTGCTGATCA CCGAGTTGCT GTCCAATGCC
TACAAGCACG CTTTTGCCGA TGGCCGCAGC GGGCAGGTGG CGATTTCGTT GCACAGCCAT
GCCGGGCAGT TTGAACTGAC GGTGGCCGAC AACGGCGTGG GGGTGCCCGC CGATTTCGAT
TATTGCTCTC CCAAAACCCT CGGCCTGCAG CTGGTGACGG CACTGGTCAA TCAGCTCAAC
GGTACCCTCG AGGTGGAGAG TCGCAGCGGC ACCTGTTTCC GGGTGCGATT TGAAGGGTAA
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| Protein sequence | MQERRWQKMY LILEGEDQDP KALQQLLKDH GYTVSLRSGA GPEAAARTET AEENLPLAFL
AHFIDGIIVV DVETVGVKYA NKAFADMLGY SLEEVHRHKV WDWDAVWSRE EIEEMSATRN
WPGEHFETRL RCKDGRVLDV AISHKPIFWQ GAELVLCVIE DITERKRTER VLHLTQFTVE
KTDDQAFWMD PEGRFLYVNE AACTALGYSR EELEGMPIWE VDPNVTRENA VDYWLRLKEQ
GSMRFESLHR AKDGRIYPVE VRGNYVNYDG REYSCVFVTD LSERRQAEQQ LRQANLVLES
SPAVLYRRKA QPGWPLEMVT RNVACFGYAP NELLSGAVSF ADLVHPEDLD RVAAEGTEYT
LQGEDRFQQE YRIVTRGGDV RWVDDRTVAE RDGQGRVTHY QGIVLDITDR KRTELVMAAR
MRLIQFAATH TLDELLEATL DEAEDLTDSQ IGFFVFLDAD QKTLSMQNWS TRTKRDFCTA
QGKGLHYPVS QAGVWADCIH QRRPVIHNDY AALLHRKGLP PGHSPLMREL VVPVFRGENI
MAVVAVGNKS QTYTPQDVEA VSLLADLAWT IAESKKAEEA LENRLVALTR PLEDAAGVTF
EELFNLSDIQ RLQDDFAQAT GVASLITLPD GTPLTEPSNF CRFCTMIRAT EKGAVNCIKS
DAVLGRPSAL GSTVRKCLSG GLWGAGAAIL VGGRHIASWL IGQVRDANVT EEQVRACVRK
TGVDEEAVLE AFREIPVMPR ERFGQVAQAL NTLAGQLSSI AYQNVQQARF ITDYKQAEEA
RRKSESEYKS IVEHAPFGIT RSTREGKLLS VNPALASILK YDSVQELMET VNRSSIQEVL
FPKPEERDAL VDKVLTQDAW YVFNNRLRCK DGSIVTCRVH SRRIADEGGL IGEFESFQEN
ITDQLAAQEA LRESEEKFRV LAETSPVAIC LYQEDRHIYA NPAMERLFGY DADTLCNMNI
WDIGHEDSRD LIRERGLARL AGQSVSGQYE IKYLTKAGGE GYVLISAGLI EYQGRPTGVA
SFLDITERKR TEQLIRASLK EKDVLLREIH HRVKNNLQVV SSLLYLQSQK FSDAELQNCF
LESQSRICSM AIAHEQLYQS KNLADISIKT YLENLVQQQQ QILFSPGQQI DCRLTVEDIP
LDIEKVVPCG LLITELLSNA YKHAFADGRS GQVAISLHSH AGQFELTVAD NGVGVPADFD
YCSPKTLGLQ LVTALVNQLN GTLEVESRSG TCFRVRFEG
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