Gene Pcar_0248 details

Gene Information

• Locus tag: Pcar_0248
• Symbol: talC
• ID: 3722779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 310204
• End bp: 310851
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637749829
• Product: putative translaldolase
• Protein accession: YP_355679
• Protein GI: 77917864
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0176] Transaldolase
• TIGRFAM ID: [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family

Plasmid Coverage information

• Num covering plasmid clones: 101
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTT TCATCGACAC AGCCGATATC GACCAGATCA AGGCGGCTCA TGAAATGGGG 
CTGGTAGATG GCGTTACCAC CAATCCGTCC CTGGTTGCCA AAACCGGACG CAAGTTTACC 
GACGTCCTTA AAGATATCGT CCAATTGATC GATGGCCCGA TTTCCGCGGA AGTCGTGGCT 
ACCGACGCCG AGGGGATGAT CGCCGAAGCG CGCGAACTGA TCCAGTACCA TCCGACCAAT 
ATCGTGATCA AGATCCCCAT GACCGGCGAG GGTCTGAAGG CTACCCGCGT TCTGGCCAAA 
GACGGTGTCC GTGTCAACAT GACGCTGATT TTTTCACCGC TGCAGGCACT GCTGGCCGCC 
AAAGCCGGCG CCGCCTATGT GTCCCCCTTT GTCGGCCGAC TGGACGATGT CGGGCATGAC 
GGCATGGAAG GCGTCGATGA GATCCTGACT ATTTTCGAAA ATTACGGGTT CGATACGGAA 
ATTATCGTTG CATCGGTTCG CAGCCCGCAA CATGTCCTTA GAGCCGGACT GCAGGGGGCG 
CATATCTGCA CCATCCCCTA CAATGTCATC ATGCAACTGA CCAAACACCC CTTGACGGAC 
GTCGGCATCG AGCGCTTTCT GGCCGACTGG AAGGCGTCCC AGCAATAG 

 

Protein sequence

MKFFIDTADI DQIKAAHEMG LVDGVTTNPS LVAKTGRKFT DVLKDIVQLI DGPISAEVVA 
TDAEGMIAEA RELIQYHPTN IVIKIPMTGE GLKATRVLAK DGVRVNMTLI FSPLQALLAA 
KAGAAYVSPF VGRLDDVGHD GMEGVDEILT IFENYGFDTE IIVASVRSPQ HVLRAGLQGA 
HICTIPYNVI MQLTKHPLTD VGIERFLADW KASQQ