Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0245 |
Symbol | |
ID | 3722757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 307474 |
End bp | 307989 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637749826 |
Product | polypeptide deformylase |
Protein accession | YP_355676 |
Protein GI | 77917861 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 87 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTT TACCCATACG GCACTATCCC GATCCGGTCC TGAAAAATAA ATCCGAACCG ATCCTTACCA TCACCGAGGA AATCAAAACC CTGGCGGCGG ATATGGCTGA GACCATGTAT GCTGCACCGG GAGTGGGCCT GGCCGCCCCG CAGGTTGGCA TTAACAAAAA ACTTGTTGTG ATGGATTGCG CTCCCAAAGA AAACCCGGAG TTGATCGTGG CGATCAACCC GGAAATCATC GAACGAGAGG GAGATAGCTT CGAAGAAGAG GGCTGCCTTT CGGTACCGGG TTATTACTGC CGGATCAAAC GTAACTCGCA TGTCAAGGTT CGCTATCAGA ACCTGGAGGG ACAAACGGTA GAACGCGAGG CAACCGGGCT GCTGGCCATC GCCTTCCAAC ATGAAATTGA CCACCTGCAT GGACTGCTCT TCGTGGACCA CCTGTCTTCG TTGAAAAAAA ACATGTTTCG CAAAAAATAT CAGAAAATCC AGCGTCAACA GGAGCAGGAG CTGTGA
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Protein sequence | MAILPIRHYP DPVLKNKSEP ILTITEEIKT LAADMAETMY AAPGVGLAAP QVGINKKLVV MDCAPKENPE LIVAINPEII EREGDSFEEE GCLSVPGYYC RIKRNSHVKV RYQNLEGQTV EREATGLLAI AFQHEIDHLH GLLFVDHLSS LKKNMFRKKY QKIQRQQEQE L
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