| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0234 |
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| Symbol | csdB-1 |
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| ID | 3722746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 297106 |
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| End bp | 298308 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637749815 |
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| Product | selenocysteine lyase |
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| Protein accession | YP_355665 |
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| Protein GI | 77917850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTT ATCTGGATAA CGCCGCCACC ACCTTCCCCA AACCCGAAAG CGTCTACCGC
GCCATCGATT TTACCTTTCG TAATCTGGGC GTCAGCCCGG GGCGAGGCAG CTATCAGTTT
TCTCTGGAAG CGGGACATCT GGTGCTGGAT GTCCGGGAAA CCGTTGCCGA GTTTTTCGGT
ATCGAGGATG CTTCACGTGT GGTGTTTTAC GCCAATGCCA CCGAGGCTAT CAACGTGGCC
TTGTTCGGGC TATTGCAGCC AGGCGATCGG GTCATTACCT CGACCATAGA GCATAATGCC
GTCAGCCGTC CCCTGCACGC CCTGGCGCGG CACGGCGTCG AGTTGATTCG GGTTTCACCC
GATGCCGACG GGCGTATTCC GCCTGAAGCC ATTCGCGAAG CCGCATGCCG TGCAGCGGGG
CCGATTCGCA TGGTGGTTCT CAGTCACTGT TCCAATGTCA CCGGAGTTGT TCAACCCATC
GAGGAGATCG GTCGCTGGTG TCGCAGCGAA GGAATCGTGT TTATGGTCGA CGCGGCGCAA
AGCGCCGGCG TACTGCCCAT CGATGTGGAA ACCATGGGCA TCGATCTGCT GGCGGTACCG
GGCCATAAAT GCCTGCTGGG ACCGCCGGGA ACGGCGATTC TCTACGTCGG CCCCGAGCTT
CACCTGAAAC CGCTGCTATG GGGGGGCACC GGCGGCAATT CCATGTCGCC GCTGATGCCG
GATGCCTTGC CTGAACGGTT GGAAAGCGGC ACCCTCAACA CACCTGCACT GGCCGGCTTG
CTCGCCGGTA TCGAATTTGT GTCCCGAACC GGCCTGCAAC AGATTCATCT TCATAAGACG
AGCTTGTTAA AGCGGCTGCT GCGCGGGTTG CATAACCTGC CCGGTATCCG GTGTTATCCT
CATGCCGGAG CGCAGCATGG GGGAGGGGTG TTGTCTTTCA ATGTGGAGGG TCGTGATCCG
GCGGAAATCG GTTTTTTGCT CGATGATGTG TATGGCATCT GCGTACGTAC CGGGCTGCAC
TGCGCCCCCG ATGCCCATCG CAGTATCGGA ACCTTGCCCA GCGGCACCAT CCGCGTCAGC
CCCGGTGTGT TTAATACCGA CAAAGATATC GATGCCTTGC TTGGGGCTCT GAATGACATG
CTCGGGAACC GGCGCCGGGT GGGAGCCGGT TGCCGGAACC ACCGCACCCC GTTTTTCCCA
TAA
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| Protein sequence | MAIYLDNAAT TFPKPESVYR AIDFTFRNLG VSPGRGSYQF SLEAGHLVLD VRETVAEFFG
IEDASRVVFY ANATEAINVA LFGLLQPGDR VITSTIEHNA VSRPLHALAR HGVELIRVSP
DADGRIPPEA IREAACRAAG PIRMVVLSHC SNVTGVVQPI EEIGRWCRSE GIVFMVDAAQ
SAGVLPIDVE TMGIDLLAVP GHKCLLGPPG TAILYVGPEL HLKPLLWGGT GGNSMSPLMP
DALPERLESG TLNTPALAGL LAGIEFVSRT GLQQIHLHKT SLLKRLLRGL HNLPGIRCYP
HAGAQHGGGV LSFNVEGRDP AEIGFLLDDV YGICVRTGLH CAPDAHRSIG TLPSGTIRVS
PGVFNTDKDI DALLGALNDM LGNRRRVGAG CRNHRTPFFP
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