Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0178 |
Symbol | |
ID | 3722991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 224570 |
End bp | 225730 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637749755 |
Product | Na+/H+ antiporter |
Protein accession | YP_355609 |
Protein GI | 77917794 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000000577111 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGC AGCTGGTCAC TCTCGTTACG GTGGTATTCG GCGCGGCGGT CATGCCCTTG GCGGCACGGC GCTTGTCGGT ACCGTCGGCG GCTCTCGAAA TCGTTTACGG CATGGTGCTG TTCAATACCG TGCTGGCGTC TCAGCCCGAA TGGTTCGAGT TGCTCAAGGA ACTCGGCCTG ATCTACCTGA TGTTCATCGC CGGTATGGAA TTGTCGCTGC GGGAGCTTCA AAGCAGCGGG CGTGTATTGC GCTATGTGCT GATTCCTCTG CCGGCCTTTG TCGTCATGCC GCCGTTGCTG CACCTCATGG GGCTGCCCTG GTACCTCGGC GTTGTCCTGG CCATGATTTC CGCCGGCATC GTCATCCCGG TGCTCAAAGA GTCGAGTCTG TTACAGCGCC CCCTGGGGCG CGATATTCTG GGCGTGGCGC TGGCCGGCGA GTTGATTTCG ATACTGGTGC TGACTTTGCT CGACATCTTC CATCATTACG GACTGACTCC GCATGCGCTT TTAGAATTAT TGAAACTCGT GGCCTTGCTG GGCCTGGCAG CACTGGCCCT GAAACTGCTG TATCTGGCGG CCTGGTGGCA TCCGAATCAT GTCGCGCGCG TCATGCGCAG CGAGGACCCC ACCGAAGAAG GCATCCGTCT GGTTATTTCC GTGGCGTTTG CCGGTGGCCT GGCCGCTTAC GCCGCCGGTG TCGAGCCGAT CCTCGGTTCT TTTATGGGGG GCGTAATATT CAGTCACGTT TTCAAGAGCA AGGGCCGTTT CGAGGATAAG ATCAACGCCA TCGGCTTCGG TTTTCTTACG CCGTTTTTCT TCATCGGTGT CGGCGCCGCA TTCGATCCCG CCCTGCTGGG TTCGCCGCAA ACCGTCTTGC TCGCCCTGGG ATTGACGGTG TTGTTGCTGG TCGCCAAGCT GCTGCCGTTG CTGCCGGCGC GCCTGTTCGG CTTGCGCGGT ACGGAGGCAT GCGGCATGGG CTTGCTGCTG GCGGCGCCCT TGTCCCTGCT GGTGGTGGCC GGCACCTTGG GACAAAAAAT GGGCCTGCTG TCGCCTTCGC TTAACGGCAT GCTGGTATTG ACGGCGGTGC TGGCCAGTAT CCTGTTTCCC ATGCTGTTCC GTTTGCTGGC ACCACGGCTG AAACAGGACA GGCCCGACTG A
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Protein sequence | MAEQLVTLVT VVFGAAVMPL AARRLSVPSA ALEIVYGMVL FNTVLASQPE WFELLKELGL IYLMFIAGME LSLRELQSSG RVLRYVLIPL PAFVVMPPLL HLMGLPWYLG VVLAMISAGI VIPVLKESSL LQRPLGRDIL GVALAGELIS ILVLTLLDIF HHYGLTPHAL LELLKLVALL GLAALALKLL YLAAWWHPNH VARVMRSEDP TEEGIRLVIS VAFAGGLAAY AAGVEPILGS FMGGVIFSHV FKSKGRFEDK INAIGFGFLT PFFFIGVGAA FDPALLGSPQ TVLLALGLTV LLLVAKLLPL LPARLFGLRG TEACGMGLLL AAPLSLLVVA GTLGQKMGLL SPSLNGMLVL TAVLASILFP MLFRLLAPRL KQDRPD
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