Gene Pcar_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0161 
Symbol 
ID3722974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp202655 
End bp203287 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID637749738 
Producthypothetical protein 
Protein accessionYP_355592 
Protein GI77917777 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCA GTCTGGATCT GCTGATCACT TTTGTCGTGC AGCTTTTCAT CCTCGTCGAT 
CCGGTGGGGG GGGCGCCGGT GTTTCTGGCG ATCACACCCC ACGACAGCCG CGCCGAACGT 
CGTGCCATGG CTTTGCGCGG CTGCCTGGTG GCGGGGGCGG TGGTCTGTTT CTTCATCCTG 
GCCGGGCCGT GGGTGGTGGC TTATTTCGGG ATTCAGACCG CCGCGGTACG TATCTGCGGC 
GGTATCCTGC TGTTCGCCAT CGCTCTGGAG ATGCTCTATG GCCGTATCAG CGGTACCGAG 
ACCAGCCCCG GCGAGGAGCA CCTGGCGGAA ATCAAAAAGG ACGTTTCCAT TACCCCTCTG 
GCCATCCCCC TGCTGGCCGG CCCCGGCACC ATTGCCACCG CCCTGATTTT CGCCGGTCGC 
ACCTCCGATC TGCTGGGCTA TCTCGCGTTG CTGATCGGCA CCGTGGTGGT GTTCGCCGCC 
GCCTTTGTCA TACTGATCAA AGCCGAACTG CTGACCCGCG TGATGGGCAA GCTGGGCACC 
GCCGTGGCAA CCCGTATCAT GGGGCTGGTG CTGGCTTTTC TGGCCGTGCA GTATGTTCTG 
GATGGGTTGA GTGCGGTGCT GGGGAAGGGG TGA
 
Protein sequence
MQASLDLLIT FVVQLFILVD PVGGAPVFLA ITPHDSRAER RAMALRGCLV AGAVVCFFIL 
AGPWVVAYFG IQTAAVRICG GILLFAIALE MLYGRISGTE TSPGEEHLAE IKKDVSITPL 
AIPLLAGPGT IATALIFAGR TSDLLGYLAL LIGTVVVFAA AFVILIKAEL LTRVMGKLGT 
AVATRIMGLV LAFLAVQYVL DGLSAVLGKG