| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0146 |
|---|
| Symbol | |
|---|
| ID | 3722959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 183374 |
|---|
| End bp | 184732 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637749723 |
|---|
| Product | manganese transporter NRAMP |
|---|
| Protein accession | YP_355577 |
|---|
| Protein GI | 77917762 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGC TGAAAGGCGG GGAGATGGCG AACGAACAAT ATCAGGCAGT ATCGGTTGTT
GATGGGGTGA ATGGTGAAGA ATCAAAAACG AGATCCGATA CCACAAGCTC TGCCCGATCC
AATCTCTGGA AGGCCCTCGG CCCGGGTATC CTTCTGTCTT GCGCGGCCAT CGGCGGATCC
CACCTGGTCT GGTCGACCCG CGCGGGTGCC GATTTCGGCT GGCGGCTGCT GGGGCTGATC
CTGTTAGCCA ATTTGCTGAA ATTCCCGTTT TTTCTGTACG GGCAGCGTTA TACGTCGGCG
ACCGGCGAAA GTCTGCTCGC CGGCTATCGC CGCCATGGCG TTGTCTTCGT CTGGATCTTC
CTGCTGATCA ATATTCTCAC CGGAACCATC AATATCGCCG GTGTGGCAAT GCTCAGCGGG
GCCTTGTTTA CCGGTTACGG ATGGGTCGGG GCGTCCGTAC CTCATATCAC CATCGGCCTG
ATAGCCCTCT GCGCCCTGTT GTTGCTGCTG GGGCACTACA AACTTCTCGA CTCCATGGCC
AAGGTCATTA TTATCGTGTT AGCGCTGGGA ACCATGGTGG CGGTGGCTTT TGCCGTGCCG
GGCAGTCGTA TCCTGACGGC GGATATTGTC GCCCCCGATC CCTGGACCTG GACCTCCTTT
GCCTTTCTCA TCAGTCTGCT CGGTTGGATG CCGGCGCCGG TCGATCTTTC CGCCTGGTCG
TCGCTGTGGA TCTTCAGCCG GGAGAAACAG ACCGGCCACT TTGCCACGGT GAAGGAGACC
AGCATCGATT TTTACATCGG CTACGTATCG GCGGTGTTTC TCGCGGTCAT GTTTGTCGCC
CTCGGCGCTC TGGTGATGTT CGGTTCGGGA GAATCCTTTT CGTCCAGCGG CATCGCGTTT
TCCAAACAGT TGGTCAATCT TTACGCCGCC ACCATCGGCG ATTGGTCACG CCCCCTGATC
CTGACGGCGG CCTTTTTCAC CATGTTCAGT ACCACTCTGA CGACCCTGGA CGGGTACCCC
CGTTCCCTCG CAGCCTGCTG TACCCTGATC GGCGATCTGT CGGCGCATCG GTTTCGGCAG
ATTCACAATG CCTGGATCCT TCTTTCGGCG GTTGCGGCGT CGTTGGTGGT CCTGTTCTTC
GTCAAAAACC TTATTCAGTT TCTGACTTTC GCTGCGGTGG TTTCGTTTGT CACCATGCCG
GTGCTTGCCG CCATCAACTA CAAAGTCATG ACGGGCCCCA ACGTGCCCGA AGAGTACCGA
CCCGGCTTGA TTCTCAAGTT CCTCAGTTGG TCCGGCATGC TGTTTTTTGT CATGATGACG
GCGGGCTATG TGTATGTAAC CTTCTTTCGC GGTGCCTGA
|
|---|
| Protein sequence | MRMLKGGEMA NEQYQAVSVV DGVNGEESKT RSDTTSSARS NLWKALGPGI LLSCAAIGGS
HLVWSTRAGA DFGWRLLGLI LLANLLKFPF FLYGQRYTSA TGESLLAGYR RHGVVFVWIF
LLINILTGTI NIAGVAMLSG ALFTGYGWVG ASVPHITIGL IALCALLLLL GHYKLLDSMA
KVIIIVLALG TMVAVAFAVP GSRILTADIV APDPWTWTSF AFLISLLGWM PAPVDLSAWS
SLWIFSREKQ TGHFATVKET SIDFYIGYVS AVFLAVMFVA LGALVMFGSG ESFSSSGIAF
SKQLVNLYAA TIGDWSRPLI LTAAFFTMFS TTLTTLDGYP RSLAACCTLI GDLSAHRFRQ
IHNAWILLSA VAASLVVLFF VKNLIQFLTF AAVVSFVTMP VLAAINYKVM TGPNVPEEYR
PGLILKFLSW SGMLFFVMMT AGYVYVTFFR GA
|
|---|
| |