Gene Pcar_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0087 
SymboluvrA 
ID3722882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp101160 
End bp103973 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content60% 
IMG OID637749666 
Productexcinuclease ABC, A subunit 
Protein accessionYP_355520 
Protein GI77917705 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.41309e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA AAATTGTCAT CAAAGGCGCC AACGAGCACA ACCTCAAGGG CATCGACGTT 
ACCATTCCCC GCGATCAGCT GGTGGTGATT ACCGGCGTAT CCGGCTCCGG AAAAAGCACC
CTGGCCTTCG ACACGCTGTA TGCCGAAGGC CAGCGCCGTT ATGTGGAGAG CCTGTCGGCC
TATGCCCGCC AATTTCTGGA GCAGATGTCC AAACCCGATG TGGAGAGTAT CGAAGGGCTG
TCGCCGGCCA TCTCCATCGA GCAGAAAACC ACCTCCAAAA ACCCGCGTTC CACGGTTGGC
ACCGTCACCG AAATCTACGA CTATCTGCGA CTGCTGTTCG CCCGCGTCGG CCATATTCAC
TGTCACAAAT GCGGCAAGGA GATTTCCTCC TGGACCGTAC AACAGATGGT CGACCGCATC
ATGAACCTGC CGGAAAAGAC CAAGCTGCTG CTGATGGCCC CCATCGTCCG CGGCCGCAAG
GGCGAATACC GCAAGGAACT GCGTCAACTG CAGGCGGACG GTTTCGTGCG CATCCGCATC
GACGGTGAAA TGCGGGAACT GGCCGAGGAT ATCGCCCTGG AGAAAAACAA GAAGCATACT
CTGGAGGTGG TGGTCGACCG TCTGGTGATC CGGCCGGGCA TCGAAAGCCG CCTGGCCGAT
TCCCTGGAGA CGGCCCTGCG CCTGGCCGAG GGCATTGTAC GGGTGGAAGA AGTCGACGGC
GAAAGCCACC TGTTTTCGGA ACAGCACGCC TGCGCCGACT GCGGCATTTC TTACCCGGAG
ATTACGCCGC GCATGTTCTC CTTCAACAAT CCTTACGGTG CCTGCCCAGC CTGTTCGGGG
CTCGGCACGC GCATGTACTT CGACCCGGAA GAAGTCGTCC CCAATCCGGA GTTGTCCTTG
CGCGAAGGCG CGGTGGTACC CTGGGAGACA CGCACCGGCT ATTACTATCA CCAGTTGCTG
GAGGCGCTGG CCGACCACTA CGAGTTCGAT ATCCTCACCC CGTTCGCCAA GCTGCCGGAG
CGCATCCGCC AGATTCTGCT GTACGGCTCG GGCAAGGAAA ACGTACGGTT TTTTTACGAC
CAGGGCGACC GCCGTCATTA CTACGAAAAG CCGTTCGAAG GCATCATCCC CAACCTGGAA
CGCCGCTACC ACGAAACTGA CTCGGACCGT GTGCGGGAGA ACCTCGAGCG CTACATGAAC
GTGATGCCCT GTCCAACCTG CCAGGGAGCA CGGCTGCGGC CGGAATCGCT GTTTATCCGG
GTCGGCGGCA GCAATATTCA GGAGGTCTGC GCCCTGTCCA TCCATGAGGC GGAAGGCTTC
TTCGAGGCAT TGCGCCTATC GGACAAGGAA TTCGAAATCG GGCGCCGGAT TCTCAAGGAA
ATCCGCGAGC GCCTGTCGTT TCTGACCTAC GTGGGCCTCG ACTATCTGAG TCTGGACCGG
GCCTCGGGAA CCCTGTCGGG CGGCGAAGGC CAGCGTATCC GCCTGGCCAC CCAGGTCGGC
TCGTCCCTGG TGGGGGTATT GTATATTCTC GACGAACCCT CCATCGGCTT GCATCAACGG
GACAATCGGC GCTTGCTCGA CACCCTCATG CGTCTGCGTG ATCTGGGCAA CACGGTACTG
GTCGTGGAGC ACGATGAGGA AACCATCCTC GAAGCGGATC ATGTCATCGA CATGGGGCCG
GGCGCCGGCG TCCATGGCGG CGAGATCGTT TCACAGGGCA CCCCCAAGCA GATCCTGGCC
GACCCGGCAT CCCTTACCGG CCGCTACCTG TCCGGCGAGA TGAGTATTCC GCTGCCTCCG
GAACGGCGCA GCAGCGACCG TTACCTGGAG ATCGTCGGAG CGCAGGAAAA CAACCTCAAA
AACGTGCAGG TCACCATTCC CCTGGGGATC ATGACCTGCG TCACCGGGGT CTCGGGATCG
GGCAAATCGA CCCTGATCAT CGACACCCTG TTCAAAGCCC TTTCCCAGCG ACTTTACCGT
TCGCGGGATA AAGCCGGCAA AGTCGGCGAA ATCCGCGGTC TGGAACACCT GGACAAGGTC
ATCGACATCG ACCAGTCTCC CATCGGCCGT ACGCCACGCT CCAATCCGGC GACCTACAGC
GGCGTTTTTA CCGATATCCG GGATCTGTTC ACCCAGCTGC CGGAAGCCAA GCTGCGCGGC
TATAAACCGG GACGCTTCTC CTTCAACGTC AAGGGCGGAC GCTGCGAAGC CTGCCAGGGC
GAAGGCATCC TCAAAATCGA GATGCACTTT CTGCCGGATG TCTACGTGCA GTGCGAAGTC
TGCAAAGGGG CGCGCTACAA CCGCGAAACC CTGGAAGTAC GCTACAAAGG CAAGAATATC
GCCGAAGTTC TGGATATGAC CGTCAATCAG GGCCTGACCT TCATGGAAAA CATCCCGCGC
ATCCGCAACA AGCTGGAAAT GCTGCGCGAT GTCGGGCTGG GCTATATCAA GCTGGGGCAA
AGCGCCACCA CCCTCTCGGG CGGTGAAGCG CAACGCGTCA AACTGGCCAA GGAACTGGGT
AAACGCAGTA CCGGGCGAAC CATCTACATC CTCGATGAAC CGACCACCGG GCTGCACTTC
GCCGATATCC AGAAACTGCT CGACGTTCTG CACCGCCTGG TCGATGCCGG CAACACAGTG
GTCATTATCG AGCACAATCT CGACGTCATC AAAACTGCCG ATCATATCAT CGATCTGGGA
CCGGAGGGCG GCAGCCGCGG TGGCGAAATC GTCGTCAGCG GCACCCCCGA GGATGTGGCC
CGCTGCTCTC GCTCTTATAC CGGTCGCTAT CTGCGCCCTT ATCTCGATCT TTAG
 
Protein sequence
MADKIVIKGA NEHNLKGIDV TIPRDQLVVI TGVSGSGKST LAFDTLYAEG QRRYVESLSA 
YARQFLEQMS KPDVESIEGL SPAISIEQKT TSKNPRSTVG TVTEIYDYLR LLFARVGHIH
CHKCGKEISS WTVQQMVDRI MNLPEKTKLL LMAPIVRGRK GEYRKELRQL QADGFVRIRI
DGEMRELAED IALEKNKKHT LEVVVDRLVI RPGIESRLAD SLETALRLAE GIVRVEEVDG
ESHLFSEQHA CADCGISYPE ITPRMFSFNN PYGACPACSG LGTRMYFDPE EVVPNPELSL
REGAVVPWET RTGYYYHQLL EALADHYEFD ILTPFAKLPE RIRQILLYGS GKENVRFFYD
QGDRRHYYEK PFEGIIPNLE RRYHETDSDR VRENLERYMN VMPCPTCQGA RLRPESLFIR
VGGSNIQEVC ALSIHEAEGF FEALRLSDKE FEIGRRILKE IRERLSFLTY VGLDYLSLDR
ASGTLSGGEG QRIRLATQVG SSLVGVLYIL DEPSIGLHQR DNRRLLDTLM RLRDLGNTVL
VVEHDEETIL EADHVIDMGP GAGVHGGEIV SQGTPKQILA DPASLTGRYL SGEMSIPLPP
ERRSSDRYLE IVGAQENNLK NVQVTIPLGI MTCVTGVSGS GKSTLIIDTL FKALSQRLYR
SRDKAGKVGE IRGLEHLDKV IDIDQSPIGR TPRSNPATYS GVFTDIRDLF TQLPEAKLRG
YKPGRFSFNV KGGRCEACQG EGILKIEMHF LPDVYVQCEV CKGARYNRET LEVRYKGKNI
AEVLDMTVNQ GLTFMENIPR IRNKLEMLRD VGLGYIKLGQ SATTLSGGEA QRVKLAKELG
KRSTGRTIYI LDEPTTGLHF ADIQKLLDVL HRLVDAGNTV VIIEHNLDVI KTADHIIDLG
PEGGSRGGEI VVSGTPEDVA RCSRSYTGRY LRPYLDL