Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0075 |
Symbol | |
ID | 3722870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 91338 |
End bp | 91877 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637749654 |
Product | hypothetical protein |
Protein accession | YP_355508 |
Protein GI | 77917693 |
COG category | [R] General function prediction only |
COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.00225789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGAAT TCAACGTACT TGTCACCATG GCCCAGGATG GCCGCTACCG CCAGATGTTG GAGGAACTCG CCCCTCACGG CGAATTTCAC AAAACAGAAT TTCACGGCGT GGCTTTGGGG CGGGTCGCCA GCATCCTGCA ATTTTTGGAA ACGGTCCGAA GTCAGCGTGA AGAGCGGATC ATCGCCTTTC AGGATATAAG CCGCGTGGTG CCTCTGGACA AGGTCTTCAC CTTCGATCTG GACGATTTTC TCGCCAAAGC CTGTCAGGCC ATCCGCCCTT ACCTGCCGCA GATGAGCGAA CACCGCTTCC ATGTGCGCCT CGAACGACGG GGCCTCAAGG GGGAAATCGT CTCGCCCGAC ATCGAGCAGG CACTGGACAA CTTCATCCTC GATGAGCTGG CCGACCTGGG GCATTCCGGC CATGTCGATT TTGACAAGCC CGATGCGGTA TTGGCCATCG AAACCGTCGG CACCCGCTGC GGCATCGGCT TCATCACCCG CGAACTAAAC GATCGTTATC CCTTTGTGCA TGTCGATTGA
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Protein sequence | MWEFNVLVTM AQDGRYRQML EELAPHGEFH KTEFHGVALG RVASILQFLE TVRSQREERI IAFQDISRVV PLDKVFTFDL DDFLAKACQA IRPYLPQMSE HRFHVRLERR GLKGEIVSPD IEQALDNFIL DELADLGHSG HVDFDKPDAV LAIETVGTRC GIGFITRELN DRYPFVHVD
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