Gene Pcar_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0075 
Symbol 
ID3722870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp91338 
End bp91877 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content57% 
IMG OID637749654 
Producthypothetical protein 
Protein accessionYP_355508 
Protein GI77917693 
COG category[R] General function prediction only 
COG ID[COG1818] Predicted RNA-binding protein, contains THUMP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00225789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGAAT TCAACGTACT TGTCACCATG GCCCAGGATG GCCGCTACCG CCAGATGTTG 
GAGGAACTCG CCCCTCACGG CGAATTTCAC AAAACAGAAT TTCACGGCGT GGCTTTGGGG
CGGGTCGCCA GCATCCTGCA ATTTTTGGAA ACGGTCCGAA GTCAGCGTGA AGAGCGGATC
ATCGCCTTTC AGGATATAAG CCGCGTGGTG CCTCTGGACA AGGTCTTCAC CTTCGATCTG
GACGATTTTC TCGCCAAAGC CTGTCAGGCC ATCCGCCCTT ACCTGCCGCA GATGAGCGAA
CACCGCTTCC ATGTGCGCCT CGAACGACGG GGCCTCAAGG GGGAAATCGT CTCGCCCGAC
ATCGAGCAGG CACTGGACAA CTTCATCCTC GATGAGCTGG CCGACCTGGG GCATTCCGGC
CATGTCGATT TTGACAAGCC CGATGCGGTA TTGGCCATCG AAACCGTCGG CACCCGCTGC
GGCATCGGCT TCATCACCCG CGAACTAAAC GATCGTTATC CCTTTGTGCA TGTCGATTGA
 
Protein sequence
MWEFNVLVTM AQDGRYRQML EELAPHGEFH KTEFHGVALG RVASILQFLE TVRSQREERI 
IAFQDISRVV PLDKVFTFDL DDFLAKACQA IRPYLPQMSE HRFHVRLERR GLKGEIVSPD
IEQALDNFIL DELADLGHSG HVDFDKPDAV LAIETVGTRC GIGFITRELN DRYPFVHVD