Gene Pcar_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0072 
Symbol 
ID3722867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp87863 
End bp88540 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content50% 
IMG OID637749651 
Productouter membrane immunogenic protein 
Protein accessionYP_355505 
Protein GI77917690 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.17135e-22 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGCT TGCGCACTAT TTTTGGGGCT TTGGTTGTAG CCGTCCTGAT GAGCGGGCCG 
GTATATGCTG GAAATATGAT GGGGGCCGAA GCATTGTCTG ATTATTCCGG CCCGTACATC
GGTGGCTTTG TGGGCCACTC ATGGGCCGAC TTGGAATATA GTGACTCGTG GAATCCCGGG
TATGATCTTA ATGCGGATAT TGAGGGATTT GTCGGTGGAC TTTACTTCGG CCATAACTAT
ATGATCGATA ACATTATGTT AGGCTTTGAA GCTGATGCCG GCATTGGTGA CCTGGGTGAA
GGTGCCGACA AAAATAACTC CTACAATGAT TGGTCGGCCT TTGACATTGA CTGGGATGCG
CATCTTCGAG CACGCGCAGG CTTTGTCTAC AACACCACGC TGTTCTATGT TGCCGGTGGT
CTGGCCGTTG CGAAGGTTGC CGTTGATGAT ACGGATTCAG GGTATGGCGG AGACAATGCT
ACACATTTCG GCTGGACGAT TGGCGCTGGC ATTGAGCAAA AAATCACCGA GCACCTGACT
GCACGGATTG AATATCTTTA TGACGACTAC GGTAGCGAGA GTTACTCGAT TGAAGATTCG
TGGTGGGGGG ATACATACTC GGCAGATATC GATTTGGAGA TTCATACCGC CCGCCTTGGT
CTGGCTTATT CATTTTAA
 
Protein sequence
MLRLRTIFGA LVVAVLMSGP VYAGNMMGAE ALSDYSGPYI GGFVGHSWAD LEYSDSWNPG 
YDLNADIEGF VGGLYFGHNY MIDNIMLGFE ADAGIGDLGE GADKNNSYND WSAFDIDWDA
HLRARAGFVY NTTLFYVAGG LAVAKVAVDD TDSGYGGDNA THFGWTIGAG IEQKITEHLT
ARIEYLYDDY GSESYSIEDS WWGDTYSADI DLEIHTARLG LAYSF