| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0069 |
|---|
| Symbol | |
|---|
| ID | 3722864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 85203 |
|---|
| End bp | 86336 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637749648 |
|---|
| Product | NADH:flavin oxidoreductase |
|---|
| Protein accession | YP_355502 |
|---|
| Protein GI | 77917687 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0000720309 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC TTTTTTCTCC GGCGGTGATC GGTGGCATGG CCCTGCGCAA CCGCACCGTT
CGTTCTGCCA CCTGGGAAGG CATGGCTGCC GATGATGGCG CCGCCACCCC TGAACTTATC
GACCTGATGG CCAGTCTGGC CCGCAACGAC GTGGGTCTCG TCATCACCGG TCACGCCTTC
GTGAGTTCCG AAGGACAGGC CGGCCCCTGG CAACTCGGTG TTCACGATGA CAGCATGCTG
GAAGGTCTGA CCGCCATGGC CGGTGCGGTG CATGCCCAGG GGGGACGCAT CGCCCTGCAG
ATCGCCCATG CCGGCTGCTA CGGCGCGCAT GAACTCAGCG GACAGGAGGC CATGGGACCA
TCGGCCATGG ACGGCAGTAA GGCGCCGGTA TGCCACGCCA TGACCGCGGC GGATATCCGC
CGGGTCGTCG AAGCCTTTGC CGCCGCTGCC CTCAGGGCCA AGAAGGCCGG GTTCGACGCG
GTACAGATCC ATGCCGCCCA CGGCTACCTG CTCAGCGAGT TCCTGTCGCC CTATTTCAAC
CAACGCACGG ATGAATACGG CGGGCCGGTG GAAAATCGCG CCAAGCTGGT GCTCGAAGTC
CTGCAGGCGG TACGAAAGGC TGTCGGACCG GACTATCCGG TACTGATCAA ACTCAATTCG
GAGGATTTTG TCGAAGGCGG GGTCACCGTC GAAGACATGT TGAAGGTAGC CGAACGGCTG
CAGCAGGCCG GGATCGATGC GGTGGAAATG AGCGGCGGCA CCATCTACGC CTCGGGCGAT
ATGAGCTCGC TGCGCCCCGG TCGACTCGAC ACCCCCGACA CGGAGGTTTT CTACCGCAAG
GCCGCCGAGC TGTTCAAACA ACGCCTGACC GTACCCTTGA TCCTGGTGGG CGGCATCCTG
TCTTACGAAG TCGCCGAGAC GCTGCTGACC GAAGGCACCG CCGATTTCAT CGCTCTGTGC
CGCAGCCTGA TCCGCGAACC GGATCTGATC CGCCGCTGGC ACCGGGGCGA CCGCAGCAAG
GCCCGCTGCC TGCTGTGCAA CGGCTGCCTG GGGCCGATCA TGCAGGGCCG GGGTCCGCTC
TGCATACTGG ACAACAGGGG ATCTGACACT GGGGGGAAAG ACTCGGGGGC ATGA
|
|---|
| Protein sequence | MSKLFSPAVI GGMALRNRTV RSATWEGMAA DDGAATPELI DLMASLARND VGLVITGHAF
VSSEGQAGPW QLGVHDDSML EGLTAMAGAV HAQGGRIALQ IAHAGCYGAH ELSGQEAMGP
SAMDGSKAPV CHAMTAADIR RVVEAFAAAA LRAKKAGFDA VQIHAAHGYL LSEFLSPYFN
QRTDEYGGPV ENRAKLVLEV LQAVRKAVGP DYPVLIKLNS EDFVEGGVTV EDMLKVAERL
QQAGIDAVEM SGGTIYASGD MSSLRPGRLD TPDTEVFYRK AAELFKQRLT VPLILVGGIL
SYEVAETLLT EGTADFIALC RSLIREPDLI RRWHRGDRSK ARCLLCNGCL GPIMQGRGPL
CILDNRGSDT GGKDSGA
|
|---|
| |