Gene Pcar_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0060 
Symbol 
ID3723179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp73169 
End bp74404 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content60% 
IMG OID637749639 
ProductNAD(P)H-nitrite reductase 
Protein accessionYP_355493 
Protein GI77917678 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.45613e-15 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG TAACCGTCGG AACCGGCATG GCGGCAGCCG AATTTGTCCA GCAACTGCGT 
CAGGGCGGCT TTGCCGGTGA GATCGTGATG TGCAGCGATG AGCCCCATGC GCCTTATTCT
CCCTGCGTGA TCCCTTATCT GCTGGCCGGC GAGCCTGCAG ACAATGTGTA CTGGAAGGGG
CGCGATTTTT ACGCGCGTTA CCAGGTTACA CCTCGTCTCG GCGAAAAGGT GGTGGAGATC
GATCGGGAGG CCGGCCTGCT GCGTACGGCG AGTGGGCGTA TCGAGAATTA CGACCGGCTG
TTTTACGCCG CCGGCAGTCG CAGCTGGTTT CCGCGCCCCG AATGGCTTGA GGCCGAAGGG
GTTTTCGGTT TCAAAACCCT CTCTGACATG CAGTCCATCG ACCGCTATAT CGGCGAGCAT
GGCGTGCAGC GGGCGGTGGT GGTCGGCGGT GGCTTCATCG GCGTCGATGC GGCCCTGGCG
TTGCGCCATC GCGGTCTGCA GGTCAGCCTG GTGCATTGCC ATGAACGCCT GCTGGAGCGT
ATGACGGACG CCGATGGCGG GCGTTTCGCC ACCGATAAGC TACAACAGCG TAGCGGCATT
GCATTTTATA TGCAGTCCGA GGTCGAGGCC CTGGACTGCA ACGGCGGGCA GCTGCAACGT
GTGTGGCTGC AAAATGGCAC AGCCCTGGAG ACCCAGCTGT TGATTGTCGC CACCGGCTTT
GTACCCAATT CCGCTCTTTT GAGTGGTCGT GAGGAAGGGA TCGCCGTCGG TGACGACCTG
CTGGCCGATC CGCGCATTCT GGTGGCCGGC GATGTGGCGG TGACCCGGCA CGCCATAGAC
GGTCCCGACG GGCTTTACGC TACGGCCCCC AATGCCATCG CCCAGGCGCG AGTGGCCGCT
GCCAATATTC TGGGCGGCGT CGAACGTTAT GCCGGATCCC TGAATGCCAA CGTGCTGCGT
AAGCATATCG ACTTTCCGGT GGTTTCGGCC GGCCGGTTCG AGGGGGAAAG CGTTACCTTC
AGCAATGACC GTTTGTTTCG GCGCGTATAT CTGTGCGACG ATCGTATCAA CGGCTATATT
CTGGTAGGCG ATACCCGCCT GGCGGGCTAC ATCTATGATC TTTATGTCTC GCGTCAGCCG
GTTGCCGATA AGATCCAGGG CATCCTTGCG GATATTCGGG GGGAAAGTTA CTATCGATCC
CTTATGGGGC TGGCGCCTGT CGCGCCTGCT TGCTAA
 
Protein sequence
MKIVTVGTGM AAAEFVQQLR QGGFAGEIVM CSDEPHAPYS PCVIPYLLAG EPADNVYWKG 
RDFYARYQVT PRLGEKVVEI DREAGLLRTA SGRIENYDRL FYAAGSRSWF PRPEWLEAEG
VFGFKTLSDM QSIDRYIGEH GVQRAVVVGG GFIGVDAALA LRHRGLQVSL VHCHERLLER
MTDADGGRFA TDKLQQRSGI AFYMQSEVEA LDCNGGQLQR VWLQNGTALE TQLLIVATGF
VPNSALLSGR EEGIAVGDDL LADPRILVAG DVAVTRHAID GPDGLYATAP NAIAQARVAA
ANILGGVERY AGSLNANVLR KHIDFPVVSA GRFEGESVTF SNDRLFRRVY LCDDRINGYI
LVGDTRLAGY IYDLYVSRQP VADKIQGILA DIRGESYYRS LMGLAPVAPA C