Gene Pcar_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0054 
SymbolotsB 
ID3723173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp66608 
End bp67423 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content54% 
IMG OID637749633 
Producttrehalose-phosphatase 
Protein accessionYP_355487 
Protein GI77917672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR00685] trehalose-phosphatase 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT CCCCGCATAA AACCATGAGC CATACGCTTC CCTCAGCCCT TGAGTGTCTG 
GCAACGATTC AGCACATGTT GCAAAATAAA CGGGGCATGG TGTTTCTCGA TTACGACGGA
ACCCTCACCC CTATCGTTGA ACGTCCCGAA TGGGCTCAGC TCTCGCAGAA GATGCGCGAT
GCCGTCAACC AGCTATCCCA GCGATGTGAT GTGGCGATTG TCAGCGGTCG CGATCTGCAG
GATATCCGGA ATCTGGTTGG CATCGAAGGC ATTCTGTATG CCGGCAGCCA CGGCTTCGAC
ATTTCGGGAC CGGGCGGACA CCTGGAACTG GAACAGGGCA TCGATTACCT GCCCGCTTTG
GATCGTGCCG AAACAGCTTT GACGAAACAA CTTGCGGAGG TTGCCGGCAC CCAGATCGAA
CGCAAGCGCT TTGCCATCGC CGTTCACTTC CGGCGAGCGG ATCCTGCAGA TGTTTCCCAA
ATCGAAACCA TCGTGGACAC GATCCTGGAG AAGAATCCCG GACTGCGCAA AACCGGCGGC
AAAATGATTT TTGAACTGCG CCCCGATATC GACTGGGACA AAGGCAAAGC CCTGCGCTGG
ATTCTTGCCC GACTGGGCAT GCATGATGAC GAGGTACTGC CCATCTATAT CGGCGACGAT
TTGACCGACG AGGACGCGTT CTGCGAACTG CAGAAAAGGG GTATCGCCAT TCTGGTAAGC
GATGAACAAC GACTTACCGC CGCCAACTAT GTGCTAAATG ATCCGCTTGA AGTCGAACAG
TTCCTGAAGA GGTTAAAGGT CAACCAAAAT TCTTGA
 
Protein sequence
MEFSPHKTMS HTLPSALECL ATIQHMLQNK RGMVFLDYDG TLTPIVERPE WAQLSQKMRD 
AVNQLSQRCD VAIVSGRDLQ DIRNLVGIEG ILYAGSHGFD ISGPGGHLEL EQGIDYLPAL
DRAETALTKQ LAEVAGTQIE RKRFAIAVHF RRADPADVSQ IETIVDTILE KNPGLRKTGG
KMIFELRPDI DWDKGKALRW ILARLGMHDD EVLPIYIGDD LTDEDAFCEL QKRGIAILVS
DEQRLTAANY VLNDPLEVEQ FLKRLKVNQN S