Gene Pcar_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0045 
Symbol 
ID3723164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp51111 
End bp52847 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content62% 
IMG OID637749624 
Producthypothetical protein 
Protein accessionYP_355478 
Protein GI77917663 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value3.16898e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTTGCC GCCCGAAGAA AGAGAAACGG TTGAGTCCCC TTCACCCTGA TCACGAGCAC 
CCTTTACCGA CGGAATTTTC CCGCGGCACA ACGCGGCGAG TACTGCTGAT CGTTGGCGCA
CTGCTGACCT TTTATCTGGC CGGGGTCTTC ACCCAAGGCT TCGATCGGGA CGAGTGGCAA
ACCATGGTAG CGGCGGCCGG CGTTGCCGAT GGCAGCACCC TCTACACCGA TATCTGGGAC
AATCACGGCC CCTTGTTGAC GGTTGTCCTG GGTGGTCTGA TCAAATGGCT CGACACGCAG
GATCACATGC TGCTGATGTT TGGCGGGCGC CTGCTGATGC TGGCTATGCT GGTCGTGATC
CTGTGGCTGA CCGGCCGACT GGCACGGCGC GCCTGGCCCG ACAGCCCCCT TGCCGCTCCT
CTGGCCATGG CGGTGCTGCT CTGCAGTCAG GTGTTTTTCG GAAAAGGCCT GGAAATACGT
CCGGATGTGC CACTATTGCT GGCCTGGACC ACAAGTTTGT GGCTGCTGCA GCGCGGCTTC
GACCATAACC GCAACCTCGA CTTTTTGCTG GCCGGTACGG TGCTGGGGGT CGGTTTTGCC
TTCAGTCTCA AAACCCTGCT GTTGGGAGCG GCGTGCGGCG TAGCCCTACT GGTGGTGGTG
ATCCGGCGCC GGCGACTGTA TCCCCTGTGG CTGCTCACTT TTGGCCTGGG GGTGCTCCCT
GCTCCCGTGA CCATGTTGCT GTGGCTGCGC CAGGCAGGCT CCCTGCCGGC TTTTCTGGAC
AGTTATCTGG GGCAGAACTT CGATCGCATC GCCGAATCGT GGCTGCTGGG ACTCAAAAAA
GCCTGGCAGG CAGAGGAGTT GCTGCTGTTG ACGCTGACAG CGGCGGCCTT GTATGCCGTG
CGGCGCCTGA AAAAGACATC CCTGCCGGAA GGGATAATCG CTCTGTTGGC CGTTTCGGGC
ACCCTGCTGC TTCTGTTTCT GCGGCTCCCC ACCCACTATG AACAGAGTCT GCTGCCGATT
TTGCCGGCCG CGGCGGTGAT CATTGCCTGG GCTATCGGTC AATGGTTGCT GCTGGCAAGA
AAGACACGCT GGCAGCTGCC CCTGCACAGC GTATTGCTGC TGCTGGCCAT CGCCAGCTGT
TTTGACCACG CCTGGTTCCG GCATGACAGC GATGAGGACC TGCGCATTGC CCGGATACGC
ACGGAACTGC TGCCTGATGA GGCGCTGCTA TTTGAAGGTG TGGGGCTGCC TCTGTTTCAG
CCAAGACCTT TTATCTACAA GGCCTTCGTC AACACCCTGT GCCAACGCAT CCGCGAGGGA
CAACTGGACA TCGACCCGGT TCATGAACTG GATCGCAACG ATGTCGGCTA CGCCGCCTGG
GACAAACGGG TAGCGAAAAT GGGCGACGAC ATACGGGCTT TTTTGCAGAA CAACTTCCTG
CCCCTGCGTG ACGGAGGGCT GCTGGCGGCC GGTACGGTTC TGCCGGCGAC AAGCGAAGGC
AAAATCCGCT GGAAGGTCTG CATCGCCGGA CGCTATTTCC TGGAAACCGG CGCCCCGCCC
GGCGACCTGC GGGTCGACGG ACTGCCGGTG GGCGACGTCG TTGATCTGAC CGACGGTCCC
CACACCTTTG CCTGGACCGG CGACCACGCC GTTGTTCTAA GTATCGCCCC GCCCCGCTAC
TGGGCGGCCC GCGATGCCGT TACCGCCTGG AAAACCGGAC CGCTGCCCCG GCCCTAA
 
Protein sequence
MPCRPKKEKR LSPLHPDHEH PLPTEFSRGT TRRVLLIVGA LLTFYLAGVF TQGFDRDEWQ 
TMVAAAGVAD GSTLYTDIWD NHGPLLTVVL GGLIKWLDTQ DHMLLMFGGR LLMLAMLVVI
LWLTGRLARR AWPDSPLAAP LAMAVLLCSQ VFFGKGLEIR PDVPLLLAWT TSLWLLQRGF
DHNRNLDFLL AGTVLGVGFA FSLKTLLLGA ACGVALLVVV IRRRRLYPLW LLTFGLGVLP
APVTMLLWLR QAGSLPAFLD SYLGQNFDRI AESWLLGLKK AWQAEELLLL TLTAAALYAV
RRLKKTSLPE GIIALLAVSG TLLLLFLRLP THYEQSLLPI LPAAAVIIAW AIGQWLLLAR
KTRWQLPLHS VLLLLAIASC FDHAWFRHDS DEDLRIARIR TELLPDEALL FEGVGLPLFQ
PRPFIYKAFV NTLCQRIREG QLDIDPVHEL DRNDVGYAAW DKRVAKMGDD IRAFLQNNFL
PLRDGGLLAA GTVLPATSEG KIRWKVCIAG RYFLETGAPP GDLRVDGLPV GDVVDLTDGP
HTFAWTGDHA VVLSIAPPRY WAARDAVTAW KTGPLPRP