Gene Pcar_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0044 
Symbol 
ID3723163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp50024 
End bp51082 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content61% 
IMG OID637749623 
Productglycosyltransferase 
Protein accessionYP_355477 
Protein GI77917662 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1.17079e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGT TGATCATTCA GATTCCCTGC TATAACGAAG AACAAACCCT GGAAATCGCC 
CTGCGGCAAT TGCCCCGCAG TCTGCCGGGC ATTGACTGCG TGGAGTGGCT GATCATCGAC
GATGGGTCGA CGGATCGCAC CGTTGAGGTG GCGCGCGCCT GCGGTGTCGA TCATATCGTA
AGCCACCCCC GCAACCTCGG TCTGGCCCGG GCTTTCATGA CCGGCCTGGA GGCCGCGCTG
AAAGCCGGCG CCGATATCAT TGTCAACACC GATGCCGACA ACCAGTACGA AGCGTCCGAT
ATTCCCAAAC TCCTCGAACC GATCCTGCAG CAGCGTGCCG AACTGGTGAT CGGAGCACGG
CCCATATCCA CCACCGAGCA TTTTTCCCCG ATCAAAAAAC TGCTGCAGAA ATTCGGCAGC
TGGGTGGTAC GCCAGGCCAG CGGCACCGCG GTGGACGATG CGCCGAGCGG CTTTCGTGCC
ATCAGCCGCA CCGCCGCCAC CCGTCTGGTG GTCTTTAACC GTTACACCTA CACGCTGGAA
ACCATTATCC AGGCAGGTCG CCAGGGAATG GCCATCGCCT CGGTACCGAT CCGCACCAAC
GAAGACCTGC GTCCCTCGCG GCTGGTGAAA AGTATCCGCT CCTACGTACA GCGCTCCCTG
CAGACCATTC TGCGCATTTC CGTGATCTAT TCGCCCGGAC GGTTTTTTGC CGCCCTTGCC
GTGCTGGCCG GACTGGCCGG CGTATTTTTC ATGGGACGTT TCGGATGGTT CTTCCTGCAA
GGCGCCGAGG ACAGCCATGT GCCCTCGGTG GTGCTCGGAC TGGCGGGGAT GGGGGCGGCG
CTGCTGCTGG CTATTGTCGG GATCCTGGCC GATTTGCTGG CCGTCAATCG CAAACTGCTG
GAAGATGTGC GACGCCGCCT GATCGAACTC AGTCTGGACG GTGCTGCGTC GAAACCGCCC
TGCGACGCCA CGCAGCGAGT TGCCAGCCCA CTGCCGGCAG ACACAAAAGC GACAGGATCC
AATACGCAAA CGCCGTGTAG CCCAAAGCAA CCATTGTAG
 
Protein sequence
MTKLIIQIPC YNEEQTLEIA LRQLPRSLPG IDCVEWLIID DGSTDRTVEV ARACGVDHIV 
SHPRNLGLAR AFMTGLEAAL KAGADIIVNT DADNQYEASD IPKLLEPILQ QRAELVIGAR
PISTTEHFSP IKKLLQKFGS WVVRQASGTA VDDAPSGFRA ISRTAATRLV VFNRYTYTLE
TIIQAGRQGM AIASVPIRTN EDLRPSRLVK SIRSYVQRSL QTILRISVIY SPGRFFAALA
VLAGLAGVFF MGRFGWFFLQ GAEDSHVPSV VLGLAGMGAA LLLAIVGILA DLLAVNRKLL
EDVRRRLIEL SLDGAASKPP CDATQRVASP LPADTKATGS NTQTPCSPKQ PL