| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0038 |
|---|
| Symbol | |
|---|
| ID | 3723137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 41413 |
|---|
| End bp | 43143 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637749617 |
|---|
| Product | ABC-type transport system, ATPase and permease components |
|---|
| Protein accession | YP_355471 |
|---|
| Protein GI | 77917656 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAT TGCGCTTTTT ACTGCCTTAT TTCAAACCGT ACCGGTCGAT TCTTCTGGCC
GGATTGCTGT GGCTGCTGGT GACCGATGTG TTGGGCCTTT TGGGGCCCTG GCTGCTTAAG
GTCGGGATCG ATGCCGTACA GCAGCACCGT GCGCAGACTC TGTACGGTGC CGGACTGCTG
CTGGCGGTCA TGGCGTTGCT GCGCTATGCC ACCCGCAGTC GATCCCGCCA TTGTTTTCTG
CACACCGCCT GCCGCCTGGA AAACGATTTG CGTCAGCATC TACTGGCTCG CCTGCTCCAG
CAGGGCGGGT CTTTTTTCGA CCGTTATCGC ACCGGGGATT TGTTGTCCCG GTTCACCAAC
GATATAGGCA ATCTGCGTAC TCTGGCCGGT TTCGGGCTGA TGATCTTTGT CAATACGTTG
ATGGTGTATG GCATGACCCT GGTTGTTTTA CTGGGCATGT CGCCGGTTCT GACCCTGGTT
GCGTTGTTGC CCTATCCCCT GCTGTTTTTG CTGACCCGCT ATCTGTCCAG TCGCCTGCTG
GCAGCTTCAG CCAAGGTTCA ACGAGGCCTG GGCCAGGTCA GCGAGACGCT GGAGGAGGGC
ATCGGCGGTC ACGCCGTGAT TCGCAGTTAT GGCCTGCGGA GCTTGCGCGG CGCATATTTC
GACACCCTCA ACGAACGTTA TCTGCACGCC AGCCTGGTTT TGGCCCGGTT GCGCAATGCC
ATCGGTCCCA GCATGGCGCT TATCGCACCG CTGGGCACTT TGTTGGTCTT GTACTTCGGC
GGCCGCAGGG TCATCGATCA ACAGCTGTCC CTGGGAGAAC TGGTGGCGTT TAATGCCTAT
CTGGTGCAAC TGACCATGCC GACGCTGATG CTCGGCTGGA TACTGGGGTT GGTCCAGCGC
GGTGCCGCCA GCGCCGAGCG TCTGGCGGAT ATTCTGCAGT TGCAGCAGCC GCCCAAAGGG
CTGCCTATTG CGCAGCGGCA AGGTCCGCCA GCGGTGTGCT TTCGCAACCT GACCTTCGGT
TATGTCGACA AGCCGGTATT ACGGGATTTG CAGCTGGAGG TGGCGCCCGG CAGTCTGATC
GGTGTGGCCG GCCCGACAGG TTCCGGTAAA AGTACCCTGC TGCGATTGCT GGCCGGGCTC
TATGTTCCTG AGCCGGAACA GTTGTTCATA GATGGTCGGG ATCTGACCCA ACTGGATGGC
GGGGCATACC GGCAGCGGGT CGCCATGGTG CCCCAGGAGG GTCGATTGTT CTCCGGCTCG
CTGCGGGATA ATTTGCTGTA CGCCGTGCCC GATGCCGATG ACAATCTGTT GCAAAAGGTG
GTCGAGGCCG TCTGCCTGCA GGATGACATC GCGGGTTTTG CGCAAGGATT TGACACCCGT
GTCGGGGAAG GCGGCCAGGC ACTGTCCGGG GGGCAGCGCC AGCGGGTTTG CCTCGGCCGG
GCTCTGGCCA GGGATGCCGG TCTGTGGTTG CTGGATGATC CTTTCAGCCA TCTTGATGCC
GCCACGGCGC AATCCGTATG GCGGCAGCTT CGGCGATGGC TGGTCGGGAA AACCGTTTTT
CTGGCCTCGG GACAGGCCTC TTTGCTGGCG GGGGCGGATC GCATCGTGGT GCTGGATGCC
GGACGATTGG TGGAATCCGG GACCTATGAT GCCTTGCGTG CGCAAAAAGG GGTGTACGCC
CGGTTGTTGG AAAAAGAACG ACTACAGCGT GAACTGGAGG GCTTGTCGTG A
|
|---|
| Protein sequence | MRRLRFLLPY FKPYRSILLA GLLWLLVTDV LGLLGPWLLK VGIDAVQQHR AQTLYGAGLL
LAVMALLRYA TRSRSRHCFL HTACRLENDL RQHLLARLLQ QGGSFFDRYR TGDLLSRFTN
DIGNLRTLAG FGLMIFVNTL MVYGMTLVVL LGMSPVLTLV ALLPYPLLFL LTRYLSSRLL
AASAKVQRGL GQVSETLEEG IGGHAVIRSY GLRSLRGAYF DTLNERYLHA SLVLARLRNA
IGPSMALIAP LGTLLVLYFG GRRVIDQQLS LGELVAFNAY LVQLTMPTLM LGWILGLVQR
GAASAERLAD ILQLQQPPKG LPIAQRQGPP AVCFRNLTFG YVDKPVLRDL QLEVAPGSLI
GVAGPTGSGK STLLRLLAGL YVPEPEQLFI DGRDLTQLDG GAYRQRVAMV PQEGRLFSGS
LRDNLLYAVP DADDNLLQKV VEAVCLQDDI AGFAQGFDTR VGEGGQALSG GQRQRVCLGR
ALARDAGLWL LDDPFSHLDA ATAQSVWRQL RRWLVGKTVF LASGQASLLA GADRIVVLDA
GRLVESGTYD ALRAQKGVYA RLLEKERLQR ELEGLS
|
|---|
| |