Gene Pcar_0033 details

Gene Information

• Locus tag: Pcar_0033
• ID: 3723132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 37412
• End bp: 37897
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637749612
• Product: putative nucleotide-binding protein
• Protein accession: YP_355466
• Protein GI: 77917651
• COG category: [S] Function unknown
• COG ID: [COG1666] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 71
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGTT TCGATATTGT GTCCAAAGTC GACATGCAGG AAATCGACAA TGCCGTCAAT 
CAGGCCTTGA AGGAGATTCT CCAGCGTTAC GATTTCAAGG GGACGCACAA CGAGATCAAG 
CTGGAAAACG AGGCCATCGT TTTGCTCGGG GCCGACGATT ACAAGTTGGA TGCCGTGATT 
GACGTGCTTA AAGGGAAGCT GGCCAAACGC AATGTTTCTC CTAAATGTCT CGATTTCGGC 
AAAAAAGAAC CCGCTTCCGG CACCGCGGTA CGCCAGAGGG TGGCGATCGT GCAGGGGATT 
TCCAAGGAAA AGGGCAAGGA AATCTGCAAG CTCATAAAGA ACAGTAAACT CAAGGTCCAG 
GCCCAGATCA TGGACGACCA GGTTCGCGTT TCGGGCAAAA AAATCGATGA CCTGCAGAGC 
GTTATACAGC TTCTCAAGGG TCAGGACGTA GGTATCGAAC TGCAGTTTAT CAACATGCGC 
TCCTGA 

 

Protein sequence

MPSFDIVSKV DMQEIDNAVN QALKEILQRY DFKGTHNEIK LENEAIVLLG ADDYKLDAVI 
DVLKGKLAKR NVSPKCLDFG KKEPASGTAV RQRVAIVQGI SKEKGKEICK LIKNSKLKVQ 
AQIMDDQVRV SGKKIDDLQS VIQLLKGQDV GIELQFINMR S