Gene Pcar_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0029 
Symbol 
ID3723128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp33013 
End bp34290 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID637749608 
Productputative methyl-accepting chemotaxis protein (MCP) 
Protein accessionYP_355462 
Protein GI77917647 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTG AGATCACCTA CAAGTTTGTC ATGGGGTTTA TCATCGTGGT CGCCTCGATC 
GTGGCGCTGA ACTACCTGGT TCCCGCTACG GGGCTGGTGC CCGATTATCT AGAACAGACC
TTGTCGACGA CCTGTGCCTT GCTGGTCGGT CTTTTGCTCG GCTGGTTCTT TTCCAAAGCG
TTTACCGCCA ATATTCTGGT TTTGAAAAAC GCTGCCGAGC GCATCAGCGA CGGTGACCTG
TCCGAGACCA TTTATCTGCC CAACAACCTG TTTCCCGATG AGACCGCGGA GTTGGCCGAT
TCCCTTAACC AGGTAACGAC CAGCCTGCGG GAACTGGTCG GCTATATCCG CACCTCTTCC
TCCAAAGTTG CCGAAGAATC GCAGGGGTTA TCCACCATGT CCCAGGAGGT AACCGCTTCG
GCTCACGAAG TGACCGGCGC GGTGGAAATG ATCAGCCACG GCGCGGAAAC CCAGGCGGCC
ATGGTAGAGA AAGCCTCCGA GCACTTTCGA CAGATGGCCC GGTCGGTGGA CCAGGTGGCC
GAGGCTGCCA GGGCTGTCGC CGGGGCGGCG GGGGAAACGG TACAGACAGC GGAGCGGGGA
GGACAGGTGG TCACTCTGGC CATGACCAAG CTCGGTCAGG TCCTCGATGG GGTGGAGCAG
CACGGCCAGC AGATGATGAC GTTCAGTTCC CGGGTGCAGA AAATCGGCAA GGTGGCCGAT
TTTATCACTG TCCTTTCGCA AAAGACCAAT CTCCTGGCAC TCAATGCTTC TATCGAGGCG
GCGCGTGCCG GCGAGCAAGG CCGTGGTTTT ACCGTCGTGG CTGAAGAAAT CTGTAAATTG
GCCGATTCCT CGGAACGCGC CATGGCGGAA ATTACCGAAA TGATCAACAC CCTGCAAGAG
GAGAGTGCCC AGGTGCAGGA GGTGTTGAAG GAAAACGTTC TGGAGATGAG TTCCGGACGT
TCGGCGGTGC TCCGCACCGG ACAAACTTTT GAGGAAATCG TCACCACGGC CAAGGTCGCC
GGAGAACGGG CCGAGGGCAT AAGTGTCCTG TCGAGAAAAC AGGTGGACGA GGTCGAGAAG
ATGGCCGATG CCGTTGATGA AATTGCTCGT GTGGTCACGG AGAATGCCGC GGCCAGCGAA
GAATCCTCTG CCGCCAGCGA ACAACAGTCG GCCGCCATGG AGCGTATGGC TCTTTCCGCC
CAGGGTCTCA ATGCCCTGGC TGAAGAACTG CAGGAGCGGG TCAGTCGGTT TCACCTTGGA
ACCCTGCGGA ACCCCTGA
 
Protein sequence
MRVEITYKFV MGFIIVVASI VALNYLVPAT GLVPDYLEQT LSTTCALLVG LLLGWFFSKA 
FTANILVLKN AAERISDGDL SETIYLPNNL FPDETAELAD SLNQVTTSLR ELVGYIRTSS
SKVAEESQGL STMSQEVTAS AHEVTGAVEM ISHGAETQAA MVEKASEHFR QMARSVDQVA
EAARAVAGAA GETVQTAERG GQVVTLAMTK LGQVLDGVEQ HGQQMMTFSS RVQKIGKVAD
FITVLSQKTN LLALNASIEA ARAGEQGRGF TVVAEEICKL ADSSERAMAE ITEMINTLQE
ESAQVQEVLK ENVLEMSSGR SAVLRTGQTF EEIVTTAKVA GERAEGISVL SRKQVDEVEK
MADAVDEIAR VVTENAAASE ESSAASEQQS AAMERMALSA QGLNALAEEL QERVSRFHLG
TLRNP