Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0024 |
Symbol | rfaD |
ID | 3723123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 26990 |
End bp | 27937 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637749603 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_355457 |
Protein GI | 77917642 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.495493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTG TTACCGGCGG AGCCGGTTTT ATTGGCAGCA ATATCGTACA GGCCCTCAAT GCGCGCGGGC GAGAAGATAT CCTGGTCGTC GACGATTTGA CCGACGGTAC CAAATTCGCG AATATCGCCG ATGCGCGAAT CTGCGATTAT CTCGATAAGG ATGAATTTCT CCGGCGCATC GCTTCCGGCG ACAGCTTCGG TGACCGGATT GAAGCCATCA TTCATCAGGG CGCCTGTTCG ACGACCACCG AGTGGGACGG ACGTTACATG ATGGAGAACA ATTACGCCTA CTCCAAGACC TTGCTGCATT ACTGTCTGGA GCGGCGCATT CCTTTTCTGT ATGCGTCCAG CGCGGCGACT TACGGCGGTG GCCAGGTGTT TTGCGAGGAG CCGCAGTACG AGCGGCCTCT CAACGTCTAC GGCTATTCCA AGGCGCTGTT CGATCAGTAC GTGCGGCGTG TGCTGCCCAC CGCCGACAGC CAGGTAGCGG GTTTTCGCTA TTTCAATGTC TATGGGCCGC GGGAGCAGCA CAAAGGGAGC ATGGCCAGTG TCGCCTTCCA TTTGCGCAAC CAGTTGCTCA AGGACGGCAG CGTCAATCTG TTTGAAGGGT GCGACGGATA CGGCGACGGC GAGCAGCGGC GTGATTTTAT CTATGTCGGC GATGTGGTCG ACGTCAATCT GTGGTTTCTT GACCACCCTG AGGTATCGGG TATTTACAAT GTCGGTACCG GACGCAGCCA GACCTTTAAC GATGTCGCCC ACGCGGTGCT GAAGGCTCAC GAGGGGGGCG AATTGCAGTA CGTGCCGTTC CCCGAGCATC TCAAGGGTCG CTATCAGAGT TTTACCGAAG CGGATCTGAC CCGTTTGCGC GGTGCCGGTT TTGACGGCAG CTTCCTGACC GTCGAGGAGG GCGTGGCGCG TTACATGGAA TGGCTGCAGC AGAACTGA
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Protein sequence | MLIVTGGAGF IGSNIVQALN ARGREDILVV DDLTDGTKFA NIADARICDY LDKDEFLRRI ASGDSFGDRI EAIIHQGACS TTTEWDGRYM MENNYAYSKT LLHYCLERRI PFLYASSAAT YGGGQVFCEE PQYERPLNVY GYSKALFDQY VRRVLPTADS QVAGFRYFNV YGPREQHKGS MASVAFHLRN QLLKDGSVNL FEGCDGYGDG EQRRDFIYVG DVVDVNLWFL DHPEVSGIYN VGTGRSQTFN DVAHAVLKAH EGGELQYVPF PEHLKGRYQS FTEADLTRLR GAGFDGSFLT VEEGVARYME WLQQN
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