| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0019 |
|---|
| Symbol | |
|---|
| ID | 3723409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 20829 |
|---|
| End bp | 22271 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637749598 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_355452 |
|---|
| Protein GI | 77917637 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00000140083 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTCA AGGTTCAACA AATAGATGCA TGTCGCTGGC GTATTCCACG GGAAGGCGAC
ATGCGTACCG ATGGCTTGGT GTTCGCCAAT CGCGCCATGA TGGACGCGTT GAAAAAAGAG
CATGCCCTGG AACAGGTGCG CAATGTCGCC ACCTTGCCCG GTATAGTCGG GCCGTCATTG
GCGATGCCGG ATATTCACTG GGGGTATGGG TTTCCCATCG GCGGCGTGGC GGCCTTCGAT
GACCAGCAGG GCGTGGTATC GCCGGGCGGG GTCGGCTACG ATATCAACTG CGGGGTGCGT
CTGTTGCGTT CCGATCTGGA GGTGCAGCAG GTCAGGCCGC ATTTACAGAA GCTGGCCGAT
GCCCTGTTCC GCAATGTCCC TTCCGGCATC GGTTCTCATC GCCGGGATCT GAAATTGACC
GTGGCTCAAG AGCGCAAGGT CCTGCAGCAG GGGGCCCGAT GGGTGGTCAA GCAGGGTATG
GGCAGCGAGC GGGATCTGCG GCATATCGAG GAAGGCGGGT GCATCGAAGG GGCGGATCCT
GATTTGCTGT CGGACCGGGC CCTGGAGCGG GGCCTCGATC AGTTGGGGAC GTTGGGTTCC
GGCAACCACT TCCTGGAAGT GCAGATGGTC GAGGAGATCC GGGAGCCGCA ACTGGCGCAG
GTACTGGGTC TGTTTCCGGG ACAGGTGACG GTGACGATCC ATACCGGTAG CCGAGGTCTC
GGTTATCAGG TGTGCGACGA TTATCTGCGT ATCATGCTGC GGGCGGCGGC TAAATACGGC
ATCAAACTGG CTGACCGGCA ACTGTGCTGC GCACCGCTGA ACAGTCCGGC AGGTCGTCAG
TATCTGGCTG CCATGGCCTG TGCGGCAAAC TTTGCTTTTG CCAACCGGCA GCTGATTACC
GCCTGGGTGC GGGAATCCTT CGAGCAGGTG CTGGGGCAAA GCGCCGAGGC CTTGCGTCTG
TCGGTGATTT ACGATGTTTG CCACAACATA GCCAAATACG AGCAGCATGT GGTGGACGGG
GTGCGGCGCC GGCTGTGCGT GCATCGCAAG GGCGCCACCC GTGCTTTTCC ACCCGGTCAT
CCCGATGTTC CGGAATGCTA CCGCGGCATC GGTCAGCCGG TTCTGATTCC CGGTGACATG
GGGCGTTATT CCTATGTACT GGTGGGGACC GAGGCCGGTT TCGGGGAGAC CTTCGGTTCC
ACCTGCCATG GCGCGGGGCG GGTCTTGTCG CGGCATGCCG CCAAAAAAGT GGCTCGGGGT
CGGCGTATCG AGGAGGAACT CGCCGCGCGC GGTATCGTTT TGCGGGCCGC CGGTCGCGGT
ACGGTGGCCG AAGAAATTTC CGAGGCCTAC AAGGATGTCA TGGAGGTGGT GGAGGTCGTA
CAAAAGGCCG GCATCGGTCG CATTGTGGCG CGGTTGCGGC CCCTGGCGGT GGTCAAGGGA
TAG
|
|---|
| Protein sequence | MVVKVQQIDA CRWRIPREGD MRTDGLVFAN RAMMDALKKE HALEQVRNVA TLPGIVGPSL
AMPDIHWGYG FPIGGVAAFD DQQGVVSPGG VGYDINCGVR LLRSDLEVQQ VRPHLQKLAD
ALFRNVPSGI GSHRRDLKLT VAQERKVLQQ GARWVVKQGM GSERDLRHIE EGGCIEGADP
DLLSDRALER GLDQLGTLGS GNHFLEVQMV EEIREPQLAQ VLGLFPGQVT VTIHTGSRGL
GYQVCDDYLR IMLRAAAKYG IKLADRQLCC APLNSPAGRQ YLAAMACAAN FAFANRQLIT
AWVRESFEQV LGQSAEALRL SVIYDVCHNI AKYEQHVVDG VRRRLCVHRK GATRAFPPGH
PDVPECYRGI GQPVLIPGDM GRYSYVLVGT EAGFGETFGS TCHGAGRVLS RHAAKKVARG
RRIEEELAAR GIVLRAAGRG TVAEEISEAY KDVMEVVEVV QKAGIGRIVA RLRPLAVVKG
|
|---|
| |