Gene Pcar_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0012 
Symbol 
ID3723402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp16626 
End bp17624 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID637749591 
Producthypothetical protein 
Protein accessionYP_355445 
Protein GI77917630 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value8.39505e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA AACTATCTGC TTCAGAGGCA AGCATGGAAC TGGCCGAAAC TATTCCCACG 
GAGGAATTCT TCGCCGTAAG TGCGGACTTT CTCGATTTTA TCGAAAAAGC GCCCTGTGAC
CTGTTTCGGC GTAACCGCAG CGGCGAATAT GTTCTTCTGG CTGCCCGGCA TAGCGCATTG
AGCCGTCAGG CTGTCATGGG TCTGGAGCAC TACGGTACCG ATCAAATCTA TGCCCGGACC
GACGATTCGG CATATTACAG CCGCATGTTG CGTGCCCGTT TGGACGACCT GGTCGCCAAT
CCGAATATTG AGGCATCCGT TAAAGCCAGG GCGGTACAGG CCACCTGCCG CGATGCCATG
CGTCGTGCTT TCGATGACCC CCGCGGCCCT TTCATAAGAC AGGCTTGCGA TATCATCGTG
CCGACGGTCG ATCTGATTGT AAGTGACGAT CAGGCCACCA AACATCTGGT ACGGTTGACG
GCCTTCGATC AGGCCACTTA CATACATTCA ACCAATGTCG GTATTTTCGG TGTGGCCCTG
GCCAGGTTGT TTTTTGGCCT GGATCGGTCC CACGATATGC ATAAGCTTGG CACCGGATTT
TTTTTGCATG ACCTTGGCAA GTGCCGAATT CCCATCGATA TCCTCAATAA GCCTGGGGCT
TTGACGCCGG AAGAACGGCT GGTCGTTAAC GGTCATGTGG AAGAAGGTTA TACCATTTTA
AGCGAACATG GCATCGTTAC CGATGAAGCA CGTACGATTA CCTTGCAGCA CCATGAAAAG
GATAACGGCC AGGGCTATCC CCGTGGCAGG GTGGGCTCGG ATATTCACCC CTATGCGCGC
ATTTGCCGCA TTGCCGATAT TTATGAGGCG CTGACTGCAG AGCGTCCCTA TCACAAGAGG
CGTTCCACTT TCGAAGCGCT CAAAATCATG AAGGAATACG AAGTGGCAGA TGTGGACCAG
GGGCTTTTCG CCGAGTTTAT CCGGCTTTTT ACCGCATAA
 
Protein sequence
MGNKLSASEA SMELAETIPT EEFFAVSADF LDFIEKAPCD LFRRNRSGEY VLLAARHSAL 
SRQAVMGLEH YGTDQIYART DDSAYYSRML RARLDDLVAN PNIEASVKAR AVQATCRDAM
RRAFDDPRGP FIRQACDIIV PTVDLIVSDD QATKHLVRLT AFDQATYIHS TNVGIFGVAL
ARLFFGLDRS HDMHKLGTGF FLHDLGKCRI PIDILNKPGA LTPEERLVVN GHVEEGYTIL
SEHGIVTDEA RTITLQHHEK DNGQGYPRGR VGSDIHPYAR ICRIADIYEA LTAERPYHKR
RSTFEALKIM KEYEVADVDQ GLFAEFIRLF TA