Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0012 |
Symbol | |
ID | 3723402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 16626 |
End bp | 17624 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637749591 |
Product | hypothetical protein |
Protein accession | YP_355445 |
Protein GI | 77917630 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00000839505 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA AACTATCTGC TTCAGAGGCA AGCATGGAAC TGGCCGAAAC TATTCCCACG GAGGAATTCT TCGCCGTAAG TGCGGACTTT CTCGATTTTA TCGAAAAAGC GCCCTGTGAC CTGTTTCGGC GTAACCGCAG CGGCGAATAT GTTCTTCTGG CTGCCCGGCA TAGCGCATTG AGCCGTCAGG CTGTCATGGG TCTGGAGCAC TACGGTACCG ATCAAATCTA TGCCCGGACC GACGATTCGG CATATTACAG CCGCATGTTG CGTGCCCGTT TGGACGACCT GGTCGCCAAT CCGAATATTG AGGCATCCGT TAAAGCCAGG GCGGTACAGG CCACCTGCCG CGATGCCATG CGTCGTGCTT TCGATGACCC CCGCGGCCCT TTCATAAGAC AGGCTTGCGA TATCATCGTG CCGACGGTCG ATCTGATTGT AAGTGACGAT CAGGCCACCA AACATCTGGT ACGGTTGACG GCCTTCGATC AGGCCACTTA CATACATTCA ACCAATGTCG GTATTTTCGG TGTGGCCCTG GCCAGGTTGT TTTTTGGCCT GGATCGGTCC CACGATATGC ATAAGCTTGG CACCGGATTT TTTTTGCATG ACCTTGGCAA GTGCCGAATT CCCATCGATA TCCTCAATAA GCCTGGGGCT TTGACGCCGG AAGAACGGCT GGTCGTTAAC GGTCATGTGG AAGAAGGTTA TACCATTTTA AGCGAACATG GCATCGTTAC CGATGAAGCA CGTACGATTA CCTTGCAGCA CCATGAAAAG GATAACGGCC AGGGCTATCC CCGTGGCAGG GTGGGCTCGG ATATTCACCC CTATGCGCGC ATTTGCCGCA TTGCCGATAT TTATGAGGCG CTGACTGCAG AGCGTCCCTA TCACAAGAGG CGTTCCACTT TCGAAGCGCT CAAAATCATG AAGGAATACG AAGTGGCAGA TGTGGACCAG GGGCTTTTCG CCGAGTTTAT CCGGCTTTTT ACCGCATAA
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Protein sequence | MGNKLSASEA SMELAETIPT EEFFAVSADF LDFIEKAPCD LFRRNRSGEY VLLAARHSAL SRQAVMGLEH YGTDQIYART DDSAYYSRML RARLDDLVAN PNIEASVKAR AVQATCRDAM RRAFDDPRGP FIRQACDIIV PTVDLIVSDD QATKHLVRLT AFDQATYIHS TNVGIFGVAL ARLFFGLDRS HDMHKLGTGF FLHDLGKCRI PIDILNKPGA LTPEERLVVN GHVEEGYTIL SEHGIVTDEA RTITLQHHEK DNGQGYPRGR VGSDIHPYAR ICRIADIYEA LTAERPYHKR RSTFEALKIM KEYEVADVDQ GLFAEFIRLF TA
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