| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0011 |
|---|
| Symbol | |
|---|
| ID | 3723401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 15279 |
|---|
| End bp | 16583 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637749590 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_355444 |
|---|
| Protein GI | 77917629 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000000347195 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACG ATATCGTACA TATCGGCGCA GGCGAATTGA CCTATGAGAT TCGGGCCATT
GTGGAGATTG CCGAGACGCT TCAGCGTATG GGCATCAAAA CCAACATGGA AAATATCGGC
GATCCGGTGG CCAAGGGCGA AAAAATACCC AAGTGGATGA AAAAGCTGGT GGCTGAACTG
GTTATGGAGG ATTGTTCCTA CGGCTACTGC CCCACCAAGG GGGTGCTGGA GACGCGTGAG
TTTTTGGCGG AGCGCACCAA TCGGCGCGGC AAGGCCCAAA TCACTGCCGA AGATATCATG
TTCTTCAATG GCCTGGGGGA TGCGATCCAG AAGGTATACG GCTTTCTTCG GCGCGAGGCA
CGTGTCATCG GCCCTTCGCC GACCTATTCC ACCCATTCCT CGGCCGAAGC CGCCCATGCC
GGACAACGGC CTATTTCCTA TCGTCTGGAT CCCGACAACA ACTGGTATCC GGACCTGGAC
GACTTGCGGC TATCGGTGAA ATACAACCCG GCGGTTTCCG GGATTCTGAT CATCAATCCC
GACAACCCGA CGGGCTCGGT CTATCCGGAG CGGATTCTGC GCGAGATGAT CGCCATCGCC
AGGGAATACG ATTTGTTCGT AATTTGCGAT GAGGTCTACC TGAATATCGT CTATAACGGC
CAATCGACCA AGCCCCTGTC GGATCTCATC GGCGACGTAC CCGGCATGGC ATTACGCGGT
ATCAGCAAGG ATGTGCCGTG GCCCGGCGCC CGTTGCGGTT GGATCGAAAC CTACAATGCC
GAGCGCGACC CGGTTTTCAA GCGCTACATG CAGAGCATTC TCAATGCCAA GATGGTTGAA
GTCTGTTCCA CTACCTTACC CCAGAAGGCG ATACCGCGCA TTCTGGATCA TCCCGAATAT
CCGTCCTATC TCGATGAGCG GCGGGCCCGA TACGAAAACT GTTCCAATAT TGCCTACGAG
ATTTTAAAGG ATGTACCCGG CACCAAGGTC AATCGGACGA ATGGCGCATT TTACATGAGT
GTCGTGATCA AGTCTGAAGC TTTGACCCAT AAACAGACGC TGCCTATTGA AAATGCCGAG
GTACGGAGCC TGGTGGAGCG TCTGGTCAGC CCGCCGGGGG TTTCTCTCGA TAAGCGTTTC
GTGTACTATC TGCTTGCGTC GACCGGTATA TGCGTGGTTC CCCTTTCGTC TTTCTGTACC
CGGGAAATGG GCTTTCGCAT TACCTTGCTG GAACGCGACG AAAAGGAGTT CACGCGTATT
TTCCAGACCA TCGCCGATAG CATCACGGCG TACCTGAACT CCTGA
|
|---|
| Protein sequence | MRNDIVHIGA GELTYEIRAI VEIAETLQRM GIKTNMENIG DPVAKGEKIP KWMKKLVAEL
VMEDCSYGYC PTKGVLETRE FLAERTNRRG KAQITAEDIM FFNGLGDAIQ KVYGFLRREA
RVIGPSPTYS THSSAEAAHA GQRPISYRLD PDNNWYPDLD DLRLSVKYNP AVSGILIINP
DNPTGSVYPE RILREMIAIA REYDLFVICD EVYLNIVYNG QSTKPLSDLI GDVPGMALRG
ISKDVPWPGA RCGWIETYNA ERDPVFKRYM QSILNAKMVE VCSTTLPQKA IPRILDHPEY
PSYLDERRAR YENCSNIAYE ILKDVPGTKV NRTNGAFYMS VVIKSEALTH KQTLPIENAE
VRSLVERLVS PPGVSLDKRF VYYLLASTGI CVVPLSSFCT REMGFRITLL ERDEKEFTRI
FQTIADSITA YLNS
|
|---|
| |