Gene Pcar_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0010 
SymbolmrcA 
ID3723400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp12298 
End bp14691 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content56% 
IMG OID637749589 
Productpeptidoglycan synthetase; penicillin-binding protein 1A 
Protein accessionYP_355443 
Protein GI77917628 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000754529 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA AACGCTCTAT TAAAATCATC CTCTGGTCGT GCCTCGGCCT TTTTTTGGCC 
GGATGTCTCG CTCTGGCAAC CGCCTACGGA CTGGTATCGG CTTCGTTGCC CAAGGTCGAT
ACCCTGGCCG ATTACCGTCC GCCCATCATT ACCACCATCC ATAGCGACGA TGGCACCGTT
ATCAGCGAAT TTTCCAAAGA ACGTCGCATC CTGGTCCCCA TCGTACGCAT TCCCCGTCAA
CTGATACATG CTTTTGTGGC TGCTGAAGAT TCCCATTTCT TTCAGCATCG CGGCATCGAC
CTGATGTCCA TTCTGCGGGC CGCCATTAAA AATGTCATGG CCGGCGGTAT TCGCCAGGGC
GGCAGCACCA TCACCCAACA GGTGGCCAAA AGTCTGCTGT TGACGCCCGA AAAGAAGTTT
TCGCGTAAAT TCAAGGAAGC CATCCTGGCC TGGCGCATGG AACAGAAATT ATCCAAAGAC
GATATTCTGT TTCTGTATCT CAATCAGATC TACCTGGGCC ACGGCGCCTA TGGTGTCCAG
GCCGCAGCTG AAAACTATTT CGGTAAAAAC GTCGAACAAC TGTCGCTGGC GGAATGCGCC
ATGTTGGCCG GCCTGCCGCA GGCACCCAGC CGCTATTCTC CCTACCGGCA TTTCGACCGG
GCAAAAAGAC GCCAGGCTTA TGTTCTCAGC CGCATGTTGG AAGACGGTTA CATAACCCGG
GAACAAATGG AGGTCGCCAC GGCGGATAAT GTGGCTATCC ACCCGCGCAA CAATCGACAG
ATACCCGGAG CGGCCTATTT CACCGAACAG GTGCGCCGTT ATCTGGAGGA AACATACGGA
TCGGAAACCC TCAATACCGC CGGATTAAAA GTCTACACCA CCATGGACGT CGGCATGCAG
CAAGCCGCTC AGTTGGCGGT GCAGGCCAAT CTTCTACGGC ATGACCTTCG CCGTGGCTAC
CGGGGCCCAC TACGCATCCT CGATACCGAG CAGGAAGTGG CTTTTCTGGC CGAACAGGAA
ACCCAATTTC CGCAACCGCC GGAGAAGGGG AGCCTTGTTG AAGGGGTGTT GGTCGGAACG
CGCGGCCATA ACGCCATCGT ACGCATCGGT AGCTTGACCG GCACTCTGCC ACTCAACAAG
GGTCTGGCCA ACAAGCTGCG CGTGACACGA CGTGGCACAT CGGTTAAAAA GGTCAAGGAA
CGCGTTATCA GCGTTCCTGC AGGGTCGGTG TTACAGGTAA AAATAGAACA AAGCTCCGAT
AAAAATTTGC TGCTGTCGCT GTACCAGGAA CCAGCCGCCC AGGGTGCCTT CATTGTCCTT
GATCCCCACT CGGGTGGAGT CAAGGCTCTT GTAGGTGGAT ATGATTTCAC CCAGAGTCAG
TTCAACCGGG CTATCCAGGC CCACCGGCTG CCGGGTTCCG CCTTCAAGCC TCTTATCTAC
GCCGCCGCAC TGGATAAAGG CTATACTCCC GCCACCATTA TGCTCGATAC GCCGATCATT
TACCGCGAAC AGGATGAAGA CGGAACAGAA AAGGAATGGA AGCCGAAAAA CTATGCCGAA
AGCTTCACCG GTGTCACGAC GCTGCGTCAG GCTCTGGCCC ATTCCTACAA TGTGGTTACG
GTGAAAATGC TGCAGGACAT CGGGGTAGGC TATGCCATCA ATTATGCTAA AAAACTCGGC
ATCGAGTCCC CTCTGAACCG GGATCTTACC TTGGCGCTGG GATCTTCCGC CGTATCCCCC
ATGGAACTGG CCACCGCCTA TTGCGTCTTT GCCAACGGCG GAGTTCGCAT CAAACCGGTT
TACATCACCC GCATTGTCGA TCGCAACGGT AGAGTCCTGG AATCGACGGA TCCGGCCGAT
TTTCCCGCAG GCCCTGCTGC CGATCAAAAA CTGATCAAGC AATCGCCGCA ACGGGTCATC
TCTCCTGAAA CCGCCTATCT GGTCACCAAT CTTCTCGAAA GCGTAGTCCA GGAAGGAACC
GGATTCCGGG CACGGGCGCT GCAACGTGCC ATCGCGGGTA AGACCGGTAC CACCAACGAC
CAGAAGGATG CCTGGTTTGT CGGCTACAGT CCGAAGCTGC TGGCGGTCTC CTGGGTTGGC
TACGATAAGG AACGTTCCCT GGGACCACGT GAAACCGGTT CGAGGGCTGC CGCGCCGGCC
TGGGTCGATT TTATGCAAAC GGTTCTCAAG GATCGACCAC GCCACGAATT TCCGGTACCC
GACGGTATCG AATTCCGCCC CATCGATCCG GCCACCGGTC TGCTGATTCC CGAAGACAGC
CCCAATGTAA CCATTGAAGC CTTTGCGTCG GGAACAGCGC CTACGCGCTA TACCCTGGAA
ACGCAACAGC CCCAGGCCAT CGATTTTTTC CAATTGGACA TGGAAAACAA CTGA
 
Protein sequence
MNIKRSIKII LWSCLGLFLA GCLALATAYG LVSASLPKVD TLADYRPPII TTIHSDDGTV 
ISEFSKERRI LVPIVRIPRQ LIHAFVAAED SHFFQHRGID LMSILRAAIK NVMAGGIRQG
GSTITQQVAK SLLLTPEKKF SRKFKEAILA WRMEQKLSKD DILFLYLNQI YLGHGAYGVQ
AAAENYFGKN VEQLSLAECA MLAGLPQAPS RYSPYRHFDR AKRRQAYVLS RMLEDGYITR
EQMEVATADN VAIHPRNNRQ IPGAAYFTEQ VRRYLEETYG SETLNTAGLK VYTTMDVGMQ
QAAQLAVQAN LLRHDLRRGY RGPLRILDTE QEVAFLAEQE TQFPQPPEKG SLVEGVLVGT
RGHNAIVRIG SLTGTLPLNK GLANKLRVTR RGTSVKKVKE RVISVPAGSV LQVKIEQSSD
KNLLLSLYQE PAAQGAFIVL DPHSGGVKAL VGGYDFTQSQ FNRAIQAHRL PGSAFKPLIY
AAALDKGYTP ATIMLDTPII YREQDEDGTE KEWKPKNYAE SFTGVTTLRQ ALAHSYNVVT
VKMLQDIGVG YAINYAKKLG IESPLNRDLT LALGSSAVSP MELATAYCVF ANGGVRIKPV
YITRIVDRNG RVLESTDPAD FPAGPAADQK LIKQSPQRVI SPETAYLVTN LLESVVQEGT
GFRARALQRA IAGKTGTTND QKDAWFVGYS PKLLAVSWVG YDKERSLGPR ETGSRAAAPA
WVDFMQTVLK DRPRHEFPVP DGIEFRPIDP ATGLLIPEDS PNVTIEAFAS GTAPTRYTLE
TQQPQAIDFF QLDMENN