Gene Pcar_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0008 
Symbol 
ID3723398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp10781 
End bp11515 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID637749587 
Producthypothetical protein 
Protein accessionYP_355441 
Protein GI77917626 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value3.26697e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACCA TCCGGATTAT GACCTACAAC ATCCACGGTT GCCGGGGAAC GGACGGTCGT 
ACGGACCCTG CCCGTATTCT GGAGGTTATA AGCCGCGCCG GGCCGGATAT GGTGGCGCTG
CAGGAGGTGG CAGGCTCGCT GGATAACGAT CAGGCGGCCT GGCTGGGGCA ACGTCTGGCC
ATGAATTACT ACGGTCCCGA CAGTCCTGGC GGCAATGCTT TTCTGTCGTA CTATCCCATG
CGCGCCATGC GTTATCTCGA TCTCGAAGGT GGCAGCTGCC TGTGCGCCGA TATTAATATT
GCCGGCCGTT GTCTGCATAT TTTCAATATC CGTTTACATG AACATTTTCG TCAGCGCCGT
CGCCAATGGG TACGGCTGTT CGATCCGCAG GACGGCGTTG GGTCGCATTC CACAGGATGC
CCTGTAATGC TGCTGGGGGA TTTCGGCGAC GGACCCTGGT CCCTCAGGCA CGGCTCGATA
GCGCCGGCTT TGCGTTTGGC AAAAAGCCCC TTCTGGTCCT CCACGTTTCC TTCCTGGCTG
CCGTTGTGCA GCAGGGATCG GGCTTATCTG GGGGGGCAAT TGCGCATCGT CGACTCGCGT
ATTTACAGGT ACGCCACGGC TCGACGGGCT TCTACTCATC TTCCGTTGCT GTTTACGGTG
AGAGTCGCCG ATCCGCGCAA CTATTTGCAG GCGAAGGGGG TCAAGCATGG TCGCATGGAA
ATTGCCCCGG GTTAA
 
Protein sequence
MYTIRIMTYN IHGCRGTDGR TDPARILEVI SRAGPDMVAL QEVAGSLDND QAAWLGQRLA 
MNYYGPDSPG GNAFLSYYPM RAMRYLDLEG GSCLCADINI AGRCLHIFNI RLHEHFRQRR
RQWVRLFDPQ DGVGSHSTGC PVMLLGDFGD GPWSLRHGSI APALRLAKSP FWSSTFPSWL
PLCSRDRAYL GGQLRIVDSR IYRYATARRA STHLPLLFTV RVADPRNYLQ AKGVKHGRME
IAPG