Gene Pcar_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0007 
SymbolgpsA 
ID3723397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp9750 
End bp10751 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content57% 
IMG OID637749586 
Productglycerol-3-phosphate dehydrogenase (NAD+ dependent) 
Protein accessionYP_355440 
Protein GI77917625 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1.03397e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCG GAGTTATAGG AGCGGGCAGT TGGGGAACGA CTCTGGCGGA TCTGCTGTCA 
AAAAACGGCC ATGCCGTTAC CCTCTGGGCC TACGAGCAGG ATCTGGTCGA GCGCATGCGC
AAAAGCGCTA AAAACGATCT CTATCTGCCC GATTTCACTC TGCATGAAAA GCTTGCTTAT
TCCTCGGACC TCGGTGAAGT CGCGGCCGGT AAGGATATGG TGGTGCTGGT GGCTCCCTCG
CAGGTGTTGC GCGCGGTGGT ACGCCAGGCT GAACCCCATC TGGCGAAAGA TACCATTTTA
GTGTCGGCCG CCAAGGGGAT CGAGAACGAT ACCCTCATGC CCATGTCCGA GGTGTTAAAG
GAGGTTTTAC CCGAGGAGCG CCTGCAACGT GCGGCCTATC TTTCCGGTCC TACCTTCGCG
CGCGAAGTGG CGGCCGAAAT ACCGACCGCA CTTACCGTCG CTTCCGAGGA TGAAAATATT
GCCCGGACGG TGCAGAAAAT TTTCAGTTGC GAATATTTTC GCGTCTACCG CAGCAGCGAT
ATTGTCGGTG TAGAGCTGGG TGGGGCCCTG AAAAATGTCA TTGCCCTGGC CGCCGGTATT
TCCGATGGTC TCGGGTACGG CTACAATGCT CGCGCCGCCC TTATTACCCG GGGACTAGCC
GAGATGACCA GGATTGGCGT CGCCATGGTG GCCAGGGAAC GCACCTTTAT GGGGCTTTCG
GGGATGGGAG ATCTGGTGCT GACGTGTACC GGCGATCTCT CCCGTAACCG CAGTGTGGGG
CTGGAGCTTG GCCGCGGTCG CAAGCTGGAG GATATCCTCT CCGGGATGCG GATGGTGGCA
GAAGGGGTGA AAACAACCCT TTCCGCCTAC CAGCTGGCCA AACGACTCGG AGTGGAAACG
CCGATTATCG AGCAGATGTA CCTTATTCTG TTCGAAAATA AAGATCCTCG GGATGCGGTG
GCCGACCTTA TGCAGCGTTC GCTCAAGGCT GAAATGGATT AA
 
Protein sequence
MNIGVIGAGS WGTTLADLLS KNGHAVTLWA YEQDLVERMR KSAKNDLYLP DFTLHEKLAY 
SSDLGEVAAG KDMVVLVAPS QVLRAVVRQA EPHLAKDTIL VSAAKGIEND TLMPMSEVLK
EVLPEERLQR AAYLSGPTFA REVAAEIPTA LTVASEDENI ARTVQKIFSC EYFRVYRSSD
IVGVELGGAL KNVIALAAGI SDGLGYGYNA RAALITRGLA EMTRIGVAMV ARERTFMGLS
GMGDLVLTCT GDLSRNRSVG LELGRGRKLE DILSGMRMVA EGVKTTLSAY QLAKRLGVET
PIIEQMYLIL FENKDPRDAV ADLMQRSLKA EMD