Gene RSP_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3655 
Symbol 
ID3722145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp763763 
End bp764668 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID640073329 
Product5-dehydro-4-deoxyglucarate dehydratase 
Protein accessionYP_355166 
Protein GI77465663 
COG category[M] Cell wall/membrane/envelope biogenesis
[E] Amino acid transport and metabolism 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGC AACAGATCAA GGCGGCCCTC GGCTCCGGCC TGCTCTCCTT CCCCGTCACG 
CCGTTCGACG CCGAGAACAG GTTCGCCGCC GCCCCCTACC AGAAGCACGT CGAGTGGCTG
TCCGGCTTCG ACGCGCCGGT TCTCTTCGCC GCGGGCGGCA CCGGAGAGTT CTTCTCGCTG
ACCCCCGACG AGATCCCCGC CATCGTCAAG GCCGCCAAGG AGAGCGCCGG CAAGACCGCC
ATCGTCTCGG GCTGCGGCTA CGGGACCGAG ATTGCCCGGG GCATCGCGCG TTCGGTCGAG
GCGGCGGGCG GCGACGGCAT CCTGCTGCTG CCGCATTACC TGATCGACGC GCCGCAGGAA
GGGCTCTACG CCCATGTCAG GGCGGTCTGC CAGGCCACCG GCATGGGCGT CATGGTCTAC
AACCGCGACA ATGCCGTGCT GCAGGCCGAC ACGCTGGCGC GGCTCTGTGA CGACTGCCCG
AACCTCGTGG GCTTCAAGGA CGGCACCGGC GACATCGGCC TCGTGCGCCA GATCACCGCG
AAGATGGGCG ACCGGCTGAC CTATCTCGGC GGCATGCCGA CGGCGGAGCT CTTTGCCGAG
GCCTACCTCG GGGCGAGCTT CACCACCTAC AGTTCGGCGG TGTTCAACTT CGTTCCGGCG
CTGGCCAACA AGTTCTACGC CGCGCTGCGG GCCGGGGATC GCGCCACCTG CGAGAGCATC
CTCAACAGTT TCTTCTACCC GTTCATGGAG CTCCGCTCGC GCCGCAAGGG CTATGCGGTC
GCAGCGGTCA AGGCGGGCGT GCGGCTGGTG GGCTTCGACG CGGGCCCGGT GCGGGCGCCG
CTCTCGGATC TGACCGGCGA GGAGGAAGAG ATCCTCAAGG CCCTGATCGA CGCGCATCGG
GAATGA
 
Protein sequence
MDPQQIKAAL GSGLLSFPVT PFDAENRFAA APYQKHVEWL SGFDAPVLFA AGGTGEFFSL 
TPDEIPAIVK AAKESAGKTA IVSGCGYGTE IARGIARSVE AAGGDGILLL PHYLIDAPQE
GLYAHVRAVC QATGMGVMVY NRDNAVLQAD TLARLCDDCP NLVGFKDGTG DIGLVRQITA
KMGDRLTYLG GMPTAELFAE AYLGASFTTY SSAVFNFVPA LANKFYAALR AGDRATCESI
LNSFFYPFME LRSRRKGYAV AAVKAGVRLV GFDAGPVRAP LSDLTGEEEE ILKALIDAHR
E