| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3487 |
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| Symbol | |
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| ID | 3721903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 558051 |
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| End bp | 561572 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640073153 |
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| Product | hypothetical protein |
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| Protein accession | YP_354991 |
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| Protein GI | 77465488 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.883094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCGC TCCGCCTCCT CCTCGCCGCC CTGACCTCGC GGACGCTCTG GACCTTCCTC
GGGCTCGCGC TCCTCTGCGG GCTGGTCTGG CAGTTCGGCG CGCTGGTCTC GGTGGGCGAG
ACGGTGCCGC TCGCCTCCGA CCTCGCGCGC GGGCTGGTCG TGGGCTGCAT CGCGGTGGGC
TGGCTTCTGT CGCTGCTGGC AGCCCAGCTG CGGGCGGCGC GCAGGAACCA GCTCTTCGTG
ACCGAGCTTG CGGCGCCCGC GCCCGCCGCC CCCGATCCCG GCGCGGCGGC CGTGGCCGAG
GTCGGGGCGC GGTTCCGGCA GGTGATGGCC GAGATGAAAC GCTCGCGCGT GGGCGGGCGG
CGCTTTCTGC GCGACATGCC GTGGTATCTG CTGATCGGCC CGCCCGGCAC CGGCAAGACC
ACGGCCCTGC GCCAGTCGGG GCTGCATTTC CCGATCGATC CCGGCGACGA CCTGCAAGGC
GTGGGCGGCA CGCGGAACTG CGACTGGTTC TTCACCGAAC AGGCCGTGCT GGTGGACACC
GCCGGGCGCT ACGTCCAGCA GCAGAGCGAT CCCGAGGCCG ATGCGGCGGA ATGGTCGGGT
TTTCTGGACC TTCTGAAGCG CCACCGCGGG CGGCGGGCGC TGAACGGCGT GATCGTGGCC
CTGTCGATGA CCGAGCTCCT TGGGCCCGAG CCTGCGCTGC GCGCTCATGG CCGCGAGATC
CGCAAGCGGC TGAGCGAGCT CGGCCAGAGG CTCCAGATCC GCCTGCCGGT CTATCTGATG
GTGACGAAGG CCGACCTCGT GCCGGGCTTC GAGACCTTCT TCGCGCCCCT GCCCGCGCGC
GGGCGCGAGC AGGTCTGGGG GGCGACGCTC GCGCCCGACG AACGTCCCGA GGGCGGGGCG
GTCGACCGCG AGGCCCGGGC GCTCTGGCAG GAACTCGAGG CCCGCGTCGG GCCGCGGCTG
GCCGAGGAGG CCACGCTGGC CGACCGGGCC GAGATCTTCC GCTTCCCCGC GCGGATGGCC
GAAGTCGAGG CGCCGCTGCG GGTGCTGATC GCCACCCTCT TCGGCGAGAG CCGCTACGAG
GACAGCCCCT GGCTCCGCGG CTTCTACTTC ACCTCGGCCA CGCAGGAGGG CTCGCCCATC
GACCGGATGC TCGGGGATCT GGCGGGCGCC TTCGGCCTCA GCGCGCCCGC GCCTCCCCGC
CGGGCGCGGG GCGAGACACG CTCCTATTTC CTGCACGATC TTCTGGCGAA GGTGATCTTC
CCGGAAGCCG GGCTCGGTCG CCTCGACCGG GCGGCGGAGG AGCGGCGCCG CTGGCTCTGG
CGCGGCTCGG TGGCGGGCGC GGCGCTCGCC ACGGCGGTGG CGGGGCTGGG GTTCCTTCTC
TCGTTCCTCG GCTGGTCGGG CGCCATCGAG GATCAGGCGC GGCTGACCGC GGATCTCTCC
GCCCGGCTGG CCAATGTGGC CGCGCGGCAG GCGCCGACCG AGCCGCTGGA CCTTCCCCTC
GCGCTGGAAG CCGCGACTGC CGCGGACGCC GCGCGCACGG AGCCGCCCTC GGGCCCCTTC
GCCCTCATCG GCCCCTCGGC TGCGGCCGAG ATCGAGCGGG CGGGCACCAT CGCCTACGAG
CGCACGCTGG CCAATGTGCT TGCGCCGCGG ATGGTGGCGC TGCTCGAGGC CTCGATGTGG
CGGCAGGTGC GCGATCCCGA CGACATGCTG GGCGCGCTCA AGGCCTATTT CATGCTCACC
GGCCTCGCGC CCTACGACCG CGACTTCCTG ACCGGCTGGC GGCAGGAGCA GCTGCCGCAG
CAGGCGGTGC TCGACCCGTT CCCGACCGAG GCGGCCCGCT GGCACCAGCT GGCCGCGCTT
TCCCTTTTCG GCACGCAGGG CGACCCCATC CCGCCCGACG AGGAGCTGGT GGCGGCGGCG
CTGGCCAGCA TCTGCACCAT CCCCCTCGCG GCCCGCGCCT ATGGCGCGCT GATGCAGGAT
CCCGCGGTCA CGGGCCTGCC CGACTGGATC CCGGGCGACC GCGCCGGGCC GAACGGCGCG
AGGATCTTCA CCCGCCTCTC TGGCAAGACG CTGCGGGTGG GGCTGCCCGG CGCCTTCACC
TTTGCGGGCT TTCACGAGAC GATCCTGCCG CTCGTGCCCG AGGTGGCCGC GCAGGCCACG
CTCGACCGGA CCCTCTTTGC GGGCGGCTGC GGCGGCAGCG CCGGGGCCTC GGCCGCCACG
CTCGAGGCGG ACATCCTGAA GCTCTATTCC GACGATTTCA TCGCGCGCTG GGATGGGCTT
CTGCGCGACA TCCGGCTGGC GCCGCTGACG GACTTCGCCA CCGCCACTGC GGCGATGAAG
GATCTGGCGA GCCCCGACAG TGCGCTGAAG CGGCTGCTCG CTGCGGTCGT GGCCGAGACC
GACCTCACGC GCGTTCCCGC CCCAGATGCG GCGCCGCCCG AGGGTCTCCT CAAGGCCGCC
GGCAAGAAGC TCGGGAAGGT GGGCAAGCTC GTGAAGGGGG CCGCGGCGCT GTCGGCGGGC
TCCGCTCCGC CCACGGAGCC GCCGGGGCAG GCGGTGGCGC GCCATTTCGA GCCGCTGAAG
GGGATGATCG CCGAGGTGGA GGGGGTGCCG CCGCGGATCG GGGATGCCGA ACTCGCGCTC
GGCGCGCTGG CCAATGCGCT TCAGACCGCG GCGGCCAATC CCGATCCGCA GGCGGCGCTG
ACCGCGCAGG GGGGGCTTGC CACGCTGACC GGCGGGCTGA CCGAGGTCGC CGCCCGCCTG
CCGCCCCCCA TCGGCGCCTG GCTCGAGGGG CTGGCCACGG ACACGGCCAG CGTGACGCGC
GAGGCGGCGA TCGCTCGGCT GAACGCGCGC TACCGGGCCG ACATCCTGCC CTTCTGCCGC
GCCGCCACCG CGGGCCGTTA TCCGTTCGAG CCGGGCTCGG CCATCGATGT GAACACAGCC
GATTTCCAGC GCCTCTTCGG GCCCGGCGGC CTCTTCGACG GCTTCACGGG CGACGCGCTC
GGGCCCTGGA TCGATACGAC GCGGCACCCT TGGGCCTGGC GCGCCGATCT GGGGCTCGAT
GCCCGGAGCC TCGCGCCCTT CGAGGCCGCC CGGCGGATGC GCGACGGTCT CTTCGCCGGA
GGCATCGGCC CGGTGATGGG CTTCCTGCTT CAGGCGACGG ACCTGTCGCC CAATGCCGCC
CGGGTGACGC TGAGCCTCGA CGGCCAGCAG CTTGTCTACA TGAATGCGGC CACGCCCCCC
GTGGGCATGA CCTGGCCCGG CCAGAACGGA ACGAACCTCA TCGTGCTCTC CTTCACGCCG
CTCGACGGGT CGGCCGAGGC GGTGACCTCG GAATCCGGCG CCTGGGCCTG GCTCCGGCTG
ATCGGCAAGG GCAGCCTCGC GCCCACCGCG CAGCCCGACC TGTTCCGGCT GCGCCTTGCC
GCCGGAGCCT ATGCCGCGCG CTTCGATCTC CGGGCGAATT CGGTGGAGAA CCCGCTCGAC
CTCAGGCTCT TCGGCGGGTT CCGCTGCCCG GATGGCTTCT GA
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| Protein sequence | MRALRLLLAA LTSRTLWTFL GLALLCGLVW QFGALVSVGE TVPLASDLAR GLVVGCIAVG
WLLSLLAAQL RAARRNQLFV TELAAPAPAA PDPGAAAVAE VGARFRQVMA EMKRSRVGGR
RFLRDMPWYL LIGPPGTGKT TALRQSGLHF PIDPGDDLQG VGGTRNCDWF FTEQAVLVDT
AGRYVQQQSD PEADAAEWSG FLDLLKRHRG RRALNGVIVA LSMTELLGPE PALRAHGREI
RKRLSELGQR LQIRLPVYLM VTKADLVPGF ETFFAPLPAR GREQVWGATL APDERPEGGA
VDREARALWQ ELEARVGPRL AEEATLADRA EIFRFPARMA EVEAPLRVLI ATLFGESRYE
DSPWLRGFYF TSATQEGSPI DRMLGDLAGA FGLSAPAPPR RARGETRSYF LHDLLAKVIF
PEAGLGRLDR AAEERRRWLW RGSVAGAALA TAVAGLGFLL SFLGWSGAIE DQARLTADLS
ARLANVAARQ APTEPLDLPL ALEAATAADA ARTEPPSGPF ALIGPSAAAE IERAGTIAYE
RTLANVLAPR MVALLEASMW RQVRDPDDML GALKAYFMLT GLAPYDRDFL TGWRQEQLPQ
QAVLDPFPTE AARWHQLAAL SLFGTQGDPI PPDEELVAAA LASICTIPLA ARAYGALMQD
PAVTGLPDWI PGDRAGPNGA RIFTRLSGKT LRVGLPGAFT FAGFHETILP LVPEVAAQAT
LDRTLFAGGC GGSAGASAAT LEADILKLYS DDFIARWDGL LRDIRLAPLT DFATATAAMK
DLASPDSALK RLLAAVVAET DLTRVPAPDA APPEGLLKAA GKKLGKVGKL VKGAAALSAG
SAPPTEPPGQ AVARHFEPLK GMIAEVEGVP PRIGDAELAL GALANALQTA AANPDPQAAL
TAQGGLATLT GGLTEVAARL PPPIGAWLEG LATDTASVTR EAAIARLNAR YRADILPFCR
AATAGRYPFE PGSAIDVNTA DFQRLFGPGG LFDGFTGDAL GPWIDTTRHP WAWRADLGLD
ARSLAPFEAA RRMRDGLFAG GIGPVMGFLL QATDLSPNAA RVTLSLDGQQ LVYMNAATPP
VGMTWPGQNG TNLIVLSFTP LDGSAEAVTS ESGAWAWLRL IGKGSLAPTA QPDLFRLRLA
AGAYAARFDL RANSVENPLD LRLFGGFRCP DGF
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