| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3486 |
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| Symbol | |
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| ID | 3721902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 556690 |
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| End bp | 558051 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640073152 |
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| Product | OmpA family outer membrane protein |
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| Protein accession | YP_354990 |
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| Protein GI | 77465487 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.392072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGG AGGACGATCC GTTCGGTCTG GCGACCGATG CCGCCCGCAC CCGGATCAGG
CCTTCTCCCG CCGAACGGGC GCGCCGGGCC GCGGCCGGGC CTGCTCCGGC CGAGGTGGGC
GCTGTGGCCC CGGTCCGCCC GGCCCACGGA AGGACCCATG CCAATCCGCT TGTCGCGAGC
TTCGCTCTCC TCCTCGAACT CGCGCCCGCG CTGGAAGGCA CCGCCCCGCC GCAGGAGCCG
GGGATGCTGC GTGCGCGGCT CCGCGACGGC CTGACCGAAG CCCGCGACCG GAGCGTGGCG
CAGGGCGTGC CGCTGGCGCG CGCCGACCGC GCCGCCTGGT TCGTGGCGGC GCTCCTCGAC
GATCTGGCCC TGAACACGCC CTGGGGTGCG GCCAGCGGAT GGCCGCGCCA GCCGCTCGTG
ACCGAGCTGT CGGGCGAGGT CGATGCGGGC ACCCGCTTCT TCGACCGGCT CGAAGAGCTC
GCGCGCCATC CGACGCTCGA CCCGCAGCTG CTGGAGCTGG CCTGGCTCTG CCTGTCGCTC
GGCTTTCGCG GCAAGCACCG GACGGGGCGG GAGGGCGGCG AGAGCGCGCT CTTCGCGCTC
CGCACCGGCG TAGCGCGCCT TCTGCGCAAT CCGGAGGCTG CGGCCGCGCC GCTCTCGCCG
CACTGGGAGG GGGTCGCCGC TCCCGACGCG CCGCGCCGCT TCGCGGTGCC GGTCTGGACG
GTGGGCCTTG CGGCGCTTGC GCTGATGGCC GCCCTTTACA CGGGCCTCTC GCTGCAACTG
TCGGCGCGGG CCGAGAAGCT CTTCGATCTG GCGGCCCTCG TGCCGCCGGC CGAGCGCGCG
GCCCTGTTCC GCCCCCCGCG CGAAACGGTC GCGCCGCCCC ACGAAATCAG GGTAGAACCG
GTGGTGATCG AGCTCCTGCC CGCCTTCCGC GCCTGCGCCC CCGCCGCCAC CGCGGCCGCC
CTTCAGGGCC GCGAGGATGC GCAGCTCACC ATCCTGACGC TTCAGGGCAC CGACCCCGAG
CTGTTCCGCT CGGCCCGCGC CGAGGTGAAC GCGGATTATG CGCCGCTGGT GGCCTCGGTC
GCGGCCGTCC TCGCGGAGAA CCGCGAGCTG GTGGGGGCGG TCCGTGTGAT CGGCCACACG
GACAATGTGC CGGTCCAGCG CAGCAATCCC TTCGCCTCGA ACCAGGGCCT GTCCGAGGCC
CGCGCCGCCA CCCTCGCGGC CCTCCTCGTC GAGGGCGGCG TGCCCGCGGG GATCGTCACC
GCCGAGGGCC ATGCCGACAG CGAGCCCGTC GCCGACAATG CCACGCGCGC GGGCCGGGCG
CAGAACCGCC GCGTCGAGAT CCGCATCGAG AAGAGGCTCT AA
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| Protein sequence | MTREDDPFGL ATDAARTRIR PSPAERARRA AAGPAPAEVG AVAPVRPAHG RTHANPLVAS
FALLLELAPA LEGTAPPQEP GMLRARLRDG LTEARDRSVA QGVPLARADR AAWFVAALLD
DLALNTPWGA ASGWPRQPLV TELSGEVDAG TRFFDRLEEL ARHPTLDPQL LELAWLCLSL
GFRGKHRTGR EGGESALFAL RTGVARLLRN PEAAAAPLSP HWEGVAAPDA PRRFAVPVWT
VGLAALALMA ALYTGLSLQL SARAEKLFDL AALVPPAERA ALFRPPRETV APPHEIRVEP
VVIELLPAFR ACAPAATAAA LQGREDAQLT ILTLQGTDPE LFRSARAEVN ADYAPLVASV
AAVLAENREL VGAVRVIGHT DNVPVQRSNP FASNQGLSEA RAATLAALLV EGGVPAGIVT
AEGHADSEPV ADNATRAGRA QNRRVEIRIE KRL
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