Gene RSP_3477 details

Gene Information

• Locus tag: RSP_3477
• ID: 3721893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007494
• Strand: +
• Start bp: 547466
• End bp: 547996
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640073143
• Product: hypothetical protein
• Protein accession: YP_354981
• Protein GI: 77465478
• COG category: [S] Function unknown
• COG ID: [COG3516] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03358] type VI secretion protein, VC_A0107 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.772504
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA GCAAGGCGAA GGTGATCGAA CGCAACCGCG CTCCGCGGGT GCAGATCGCC 
TATGACGTGG AGCATTACGG CAGCCCGACG ACCATCGAGC TGCCCTTCGT GATGGGGGTC 
ATGGCCGACC TCGCCGGCAA GTCCGAGACG CGCGAGGCGC AGAAACCCGC GGCCGAGCGG 
GCCTTCGTCG AGGTGGATGC CGGCCGGTTC GGCAAGTTCA TGGAGGCGCT GAGCCCGCGG 
GTGAAGGCAC GGGTCCCGAA CCGGCTGCCC GGCGGGGCGG AGGGCGGCGA GGAGGAGATG 
TTCGTCGATC TCAGCTTCCG CAGCATGGGC GATTTCGCCC CCGACCGCAT GGCCGAGCAG 
GTGCCGGCGC TGGCCGAGCT CCTGCGGATG CGGCGCCAGC TCGAAGAGCT TCTCGGCTAC 
ATGGACGGCA AGGTCAGTGC CGAGAAGCGC ATCGCCCAGC TTCTGACGAA CGAGCCGCTG 
CTCGCGCAGG TCGCGGGCGA GGCCGTGAAG TCGCGTCAGC CGGAGGAATG A 

 

Protein sequence

MSESKAKVIE RNRAPRVQIA YDVEHYGSPT TIELPFVMGV MADLAGKSET REAQKPAAER 
AFVEVDAGRF GKFMEALSPR VKARVPNRLP GGAEGGEEEM FVDLSFRSMG DFAPDRMAEQ 
VPALAELLRM RRQLEELLGY MDGKVSAEKR IAQLLTNEPL LAQVAGEAVK SRQPEE