| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3417 |
|---|
| Symbol | |
|---|
| ID | 3721702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 483781 |
|---|
| End bp | 485928 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640073084 |
|---|
| Product | TonB dependent outer membrane ferrichrome-iron receptor |
|---|
| Protein accession | YP_354922 |
|---|
| Protein GI | 77465419 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCC GACACGCGGA CAGATCGCGC CTCCTCCTCC GTCATCCCTG CCTCAGGGCG
CTCCTGCTCG GAGGGTCGGC ACTGGTGGCC TTGCCCACGG TCCTCCGCGC CCAGGATGCG
GCGGACGACG CGGCCGCGGG CGCCTTCCGC CTCTCGCCCA TCATCGTGGA TGCGGCCGCC
GCGGCCGACG ACGATGCCCG TTCGGTCGTG GCGCAGGAGC TCTGGGTCGG CGGCAAGGTC
GCGACCAGCC TGCTCGACAC GCCCGCCTCG GTGTCGGTCG TGACCCAGGC CGAGATCCGG
GCGCGCGCCG CCACCACCAC CGAGGAGGTG CTGCAATACT CCGCGGGCAT CGTCACCGAC
TATTACGGCA GCGACGACCG CAACGACTAT TTCCTCGTCC GCGGCTTTCA GGCCTCGACC
TACCGCGACG GGCTGACGCT GGGCTCGATG CGCGGCGTGC GCGAGGAGCC CTATGCCTAC
GAGCGGATCG AGGTGCTGAA GGGCGCGAAC TCGACCCTGT TCGGCGTCTC CGATCCGGGC
GGCTCGGTGA ATTTCGTGAC CAAGGTGCCG CAGTTCACCC GCTTCGGCGA GGTCTACGGC
CAGATCGGCA CCAACGACCA CAGGGAACTG GGCTTCGATC TGGGCGACGT GCTGAACGAG
CAGGGGACGC TCGCCTACCG CTTCACCGGC AAGGTGAAGG ACAGCGCGCT CGACTATGAC
ACGTCGCGCG ACGACGACGC TTTCCTGATG GGCGGTCTCA CCTGGGCGCC GACCGAGGCC
ACCACGTTGA CGCTGGTCTA CGACCATCTG AAGCGCGACG GCACGCCGAA CAGCGGCGGC
TATCCGCTCG ACCGCGAATA CGATCGCGGC GACTTCTTCG GCGAGGCCGA CTTCAACGAT
CATGATGTCG CGCGCGACAC GCTGACGGCC ATGCTGCGCC ACGATTTCGG CGGCGGGCTG
AGCCTGACCG CGAACCTGCG CTACAGCGAC CTCGCCGACG ATTTCGGCTA TATCTACCTG
TCGGATTCGG CCTCTCGCGT GGGCACCGAG CTCTCGCGCT TCTATTTCGG CACCGACAGC
ACGGCCGAAG AGCTGATCGG CAACGCCATC CTGCAATATG ACACGAGCTT CGGCAGCACC
GACAGCAGCA CGCTGGTCGG GATCGAGTAT CGCGACGCGG CGCTCTCCTC GGCGTCGTTC
TACGGTGGGG CGGGCACCAT CGACATCGCG ACGGGGATCG CGACCGGCGT GCCCTCGAAC
CTCGCGCCCT ACGAGACACG CAAGAGCGAC TACACGACGA AGTCGGTGTT CCTGCAGCAG
AACCTGTCCT TCGCCGACCG GCTGGTGGCG ACCGTGGGCC TGCGGCACGA CTGGCTCGAC
CTTAGGTCCC GCGGCACAGC TTCGGGCACG GCCTTCGACG ACAGCGACGA TTTCTCGGAG
ACCTCAGTCC GCGGTGCGCT GACCTACAAG GTCACCGACG AGGTCTCGGC CTATGCGAGC
TATGTGGAAT CGGTGGCGCC GCCCTCCATC GGGGTCGAGC CCGAGCGCGG CGAGCAATAT
GAGATCGGCG TGAAATACCA GCCCGCAGGC AGCCGGGCGC TCCTGTCGGC GGCGATCTTC
GACCTGACCC GGCAGGACAT GACGATCCCG GTCGTTCTCG GCGACGGCAC CATCGTGCGC
GAGGTGGTGG GCGAGACGCG CGTGCGCGGC TTCGAGATCG AGGGCAAGGC CGAGATCGCC
GAGAACTGGG ACGTGATCGC GGCCTATTCC TATCAGGATG CCGAGCTCAC GCGGGCGGTG
GTGCGCGGCA CCGACGTGTC GGGCAACCAG TTCGCCAACG TGCCGAAGAC CATGGCCTCG
CTCTGGGTGA ACTACACCCT GCCGGGACGG GCGCGCGGCG GCGATATGAC CTTCGGCCTC
GGCGCCCGCT ACATCGGCAG CTATCAGTTC GCGGAAACGA ACGCGACCGG CGAGAGCGAC
GCCACGACGC TCTTCGACGC GGCCTTCAGC TACGACATCG CCGAGAACAC CGGCCTGTCC
GTCAATGTGA GCAACCTCTT CGACGAGCAG CATGTCGTGG GTCGCGGCAC GGCCGACTAT
TACAACCCGG GCCGCACCGT TACGGCCACG CTGCGCCGCA CCTGGTGA
|
|---|
| Protein sequence | MTPRHADRSR LLLRHPCLRA LLLGGSALVA LPTVLRAQDA ADDAAAGAFR LSPIIVDAAA
AADDDARSVV AQELWVGGKV ATSLLDTPAS VSVVTQAEIR ARAATTTEEV LQYSAGIVTD
YYGSDDRNDY FLVRGFQAST YRDGLTLGSM RGVREEPYAY ERIEVLKGAN STLFGVSDPG
GSVNFVTKVP QFTRFGEVYG QIGTNDHREL GFDLGDVLNE QGTLAYRFTG KVKDSALDYD
TSRDDDAFLM GGLTWAPTEA TTLTLVYDHL KRDGTPNSGG YPLDREYDRG DFFGEADFND
HDVARDTLTA MLRHDFGGGL SLTANLRYSD LADDFGYIYL SDSASRVGTE LSRFYFGTDS
TAEELIGNAI LQYDTSFGST DSSTLVGIEY RDAALSSASF YGGAGTIDIA TGIATGVPSN
LAPYETRKSD YTTKSVFLQQ NLSFADRLVA TVGLRHDWLD LRSRGTASGT AFDDSDDFSE
TSVRGALTYK VTDEVSAYAS YVESVAPPSI GVEPERGEQY EIGVKYQPAG SRALLSAAIF
DLTRQDMTIP VVLGDGTIVR EVVGETRVRG FEIEGKAEIA ENWDVIAAYS YQDAELTRAV
VRGTDVSGNQ FANVPKTMAS LWVNYTLPGR ARGGDMTFGL GARYIGSYQF AETNATGESD
ATTLFDAAFS YDIAENTGLS VNVSNLFDEQ HVVGRGTADY YNPGRTVTAT LRRTW
|
|---|
| |