Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3231 |
Symbol | |
ID | 3721838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 289521 |
End bp | 291119 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640072906 |
Product | ABC peptide transporter, periplasmic binding protein |
Protein accession | YP_354746 |
Protein GI | 77465243 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.704667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCG CACATCTGCT GGCCGCGTCT TCGCTGGCCC TGATGGCTGC TGCCGGAGCC CACGCCAAGA CGCTGGTCTA TTGCTCGGAA GGGTCGCCCG AGGGGTTCGA CCCCGCGCCC TACACCGCCG GCACCACCTT CGACGCGGCC TCGCAGGCGG TCTACAACCA GCTCGTCGAG TTCAAGCCGG GCACGACCGA GATCGCCCCC GCGCTGGCCG AGAGCTATGA GATCTCGGAC GACGGGCTGG AATACACCTT CCACCTGCGG CCGGGCGTCA AGTTCCACAC GACCGACTTC TTCACGCCCA CGCGCGAGAT GAACGCCGAC GACGTGATCT TCTCGTTCCT GCGTCAGGGC GACGAATCCA GCCCGTGGCA CCAGTATGTG GCCGGGATCA CCTACGAATA TTACAGCGGC ATGGAAATGC CGACCGTGAT CAAGGAGATC CAGAAGGTCG ACGACCTGAC GGTGAAGTTC GTGCTGACCC GTCCCGAGGC GCCCTTCCTC GCCAATCTCG CGATGGACTT CGCCTCGATC CTGTCGAAGG AATATGCCGA CAAGCTGGAG GCCGAGAACC GCAAGGAAGA CCTGAACAAC GCGCCGGTCG GCACCGGCCC GTTCAAGTTC GTGGCCTACC AGAAGGACGC GGTCATCCGC TATCAGGCCA ATGACGACTA CTGGGCCGGG CGCGAGAAGA TCGACGATCT GATCTTCGCC ATCACCCCCG ATCCGGCGGT GCGGATGCAG AAGCTGCAGG CCGGCGAATG CCACATCATG CCCTATCCGG CGCCCGCCGA CATCGAGGCG CTGAAGGCCG ACGAGAACCT GCAGGTGATG GAGCAGCCGG GCCTGAACGT GGCCTATCTC GCCTACAACA CCACCGTGGC GCCCTTCGAC AATCCGAACG TCCGCAAGGC GCTCAACATG GCGATGAACA AGGAGGCCAT CCTCGAGGCG GTCTTCCAGG GCACGGGGCA GGTCGCCAAG AACCCGATCC CGCCGACCAT GTGGAGCTAC AACGACGCGG TCGAGGACAC GGCCTTCGAT CCCGAAGCGG CCAAGAAGCT CCTCGAGGAA GCCGGCGTGT CGGATCTCTC GATGGAGATC TGGGCGATGC CGGTGCAGCG TCCCTACATG CCGAACGCCC GGCGCACGGC CGAGCTGATG CAGGAAGACT TCGCCAAGAT CGGCGTCAAG GTCGAGATCG TCTCCTACGA GTGGGGCGAG TATCTGAAGA AATCGACCGA CCCGTCGCGC AAGGGCGCGG TCATCCTCGG CTGGACGGGC GACAACGGCG ACCCGGACAA CTTCATGGGC GTGCTGCTGG GCTGCTCGGC CACCGGCGAC GGCGGCGCGA ACCGCGCGCA ATGGTGCAAC AAGGAGTTCG ACGACCTGAT CCAGAAGGCG AAGGTCACGG CGGATCAGGC GGAGCGCACC AAGCTCTACG AAGAGGCGCA GGTCGTCTTC AAGCGCGAGA ACCCCTGGGC CACCATCGCC CATTCGACGG TCTTCATGCC GATGTCGAAG AAGGTCTCGG GCTATGTGAT GAACCCGCTG GGCAAGCACA GCTTCTCGGG CGTCGATATC GAAGAGTGA
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Protein sequence | MKFAHLLAAS SLALMAAAGA HAKTLVYCSE GSPEGFDPAP YTAGTTFDAA SQAVYNQLVE FKPGTTEIAP ALAESYEISD DGLEYTFHLR PGVKFHTTDF FTPTREMNAD DVIFSFLRQG DESSPWHQYV AGITYEYYSG MEMPTVIKEI QKVDDLTVKF VLTRPEAPFL ANLAMDFASI LSKEYADKLE AENRKEDLNN APVGTGPFKF VAYQKDAVIR YQANDDYWAG REKIDDLIFA ITPDPAVRMQ KLQAGECHIM PYPAPADIEA LKADENLQVM EQPGLNVAYL AYNTTVAPFD NPNVRKALNM AMNKEAILEA VFQGTGQVAK NPIPPTMWSY NDAVEDTAFD PEAAKKLLEE AGVSDLSMEI WAMPVQRPYM PNARRTAELM QEDFAKIGVK VEIVSYEWGE YLKKSTDPSR KGAVILGWTG DNGDPDNFMG VLLGCSATGD GGANRAQWCN KEFDDLIQKA KVTADQAERT KLYEEAQVVF KRENPWATIA HSTVFMPMSK KVSGYVMNPL GKHSFSGVDI EE
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