| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3197 |
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| Symbol | rnfE |
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| ID | 3721805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 250706 |
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| End bp | 251440 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640072874 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_354714 |
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| Protein GI | 77465211 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0099576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCACGG ACTTCGGCAA GATCGCCCGC GACGGGCTCT GGGACAAGAA CATCGTGGTG
GGCCAGATGC TGGCGCTCTG TCCCACGCTC GCCATCACCG GCACGGCCAC CAATGGGCTC
GGGATGGGGC TGGCCACCAC CGCCGTCCTC ATCCTGTCGA ACGCGGCCAT CTCGGCCCTG
CGCCGCGCCA TCACGCCCGA GATCCGCATC CCGGCCTTCG TCCTCGTGAT CGCGGCCATC
GTGACGGTGG TCGATCTCGC GCTGAATGCC TGGGTCCACG ACCTGCACAA GGTTCTGGGC
CTCTTCATCG CGCTGATCGT CACGAACTGC GCCATTCTCG GGCGCGCCGA AGCCTTCGCC
TCGCGCCACG GCATCCTCGC TTCGGCCTTC GACGGGCTGA CCATGGGCGT GGGCTTCACG
CTGGCGCTGG TCCTCGTCGG GGCGGTGCGC GAGCTGGTGG GGTCTGGCAC GCTCTTCGCG
CAGGCCTCGG TGCTGCTCGG GCCGCATTTC GCCTTCATGG AGCTCACGAT CCTGCCCGAC
TATCCGGGCT TCCTGATCGC CATCCTGCCG CCGGGCGGCT TCATCCTGCT CGGCGTCATC
CTCGCGCTGA AGTCCATCGT CGACAGCCGC AAGAAGAGCC TCGAGCAGGA GATCCGGGAT
CTGCGCGTCG AACGCGTGTT CACCGCGGCC GGCGTGCTGA CGCCGCGGCT GCAAGAGGCG
GGGGACGACG CATGA
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| Protein sequence | MSTDFGKIAR DGLWDKNIVV GQMLALCPTL AITGTATNGL GMGLATTAVL ILSNAAISAL
RRAITPEIRI PAFVLVIAAI VTVVDLALNA WVHDLHKVLG LFIALIVTNC AILGRAEAFA
SRHGILASAF DGLTMGVGFT LALVLVGAVR ELVGSGTLFA QASVLLGPHF AFMELTILPD
YPGFLIAILP PGGFILLGVI LALKSIVDSR KKSLEQEIRD LRVERVFTAA GVLTPRLQEA
GDDA
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