Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3195 |
Symbol | rnfD |
ID | 3721803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 248946 |
End bp | 250034 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640072872 |
Product | RnfD protein |
Protein accession | YP_354712 |
Protein GI | 77465209 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC CGCTCATCAT CTCGGGTCCC CATACCCACA CGCTCTTCAC CGTCTCGCGC ACCATGCTGA CGGTGAGCGC GGCGCTGGCG CCCGCCACGC TCTTCGGCCT GTGGATGTTC GGCTGGCCCG CGATCTTCCT CTTCCTCGTG ACGGTGGCCT CGGCCTGGCT GTTCGAGGTG GCCTGCCTCC GGGTCGCGGG CAAGCCCGTG GCGCGGTTCG CGGGCGACGG CTCGGCCATC TTGACGGGCT GGCTCGTGGC CATGACGCTG CCGCCCTATG CGCCTTGGTG GCTCGGCATG ACGGGCTCGG CCATCGCCAT CGTCATCGCG AAACATCTCT TCGGCGGCCT CGGCCAGAAC CTCTTCAACC CGGCCATGGT CGCCCGCGCC ATGCTGCTCA TCGCGCTGCC CGTCCACATG ACGACCTGGG TCGCGCCGGT GGGATTGCCC GAGGGGCCGG GCTTCCTCGA CGGCCTCGCC ATCACCTTCG CGGGTTCGCA GGAGTTCGAC GCGGTCTCGA GCGCGTCCAC GCTGAGCCAC ATCAAGAGCC AGATCGGCGC GGGCGCCACC ATGTCCGAGA TCGCGCCGGA TCTGTCCGAT CTCGAGGCGC GGCTGATCGG CCTCGTTCCG GGCAGCCTCG GCGAGACCAG CACGATCCTC CTTCTCCTCG GAGGCATCGC GTTGATGGCG CTGCGCATCA TCACGCCGGT GATCCCACTC TCGGTGCTGG GCACGCTGGC CGGGCTCTCG GCGGTGGCCT CGACCCTCGC CCCCGACCGG TTCGCGCCGC CGCTCCTGCA TCTGACCTCG GGCTCGACGA TGCTCTGCGC CTTCTTCATC GCGACCGACT ATGTGACCTC GCCGGTCACT GCGATGGGCA AGCTCGTCTA TGGCGTGGCG ATCGGCGCGC TCGTCTTCGT GATCCGCACC TGGGGATCGT TCCCTGAGGG CGTGGCCTTC GCGGTGCTTT TGATGAATGC CTGCACGCCG CTGATCGAAA CCTATGTGCG CCCGCGCGTC TTCGGCCGCA CCCGGACGGG CAAGTCCCTG CCGGTCAAGG CCCGGACGCC GCGCGGAGGG AAGAGATGA
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Protein sequence | MTAPLIISGP HTHTLFTVSR TMLTVSAALA PATLFGLWMF GWPAIFLFLV TVASAWLFEV ACLRVAGKPV ARFAGDGSAI LTGWLVAMTL PPYAPWWLGM TGSAIAIVIA KHLFGGLGQN LFNPAMVARA MLLIALPVHM TTWVAPVGLP EGPGFLDGLA ITFAGSQEFD AVSSASTLSH IKSQIGAGAT MSEIAPDLSD LEARLIGLVP GSLGETSTIL LLLGGIALMA LRIITPVIPL SVLGTLAGLS AVASTLAPDR FAPPLLHLTS GSTMLCAFFI ATDYVTSPVT AMGKLVYGVA IGALVFVIRT WGSFPEGVAF AVLLMNACTP LIETYVRPRV FGRTRTGKSL PVKARTPRGG KR
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