| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2578 |
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| Symbol | xoxF |
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| ID | 3720211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1222240 |
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| End bp | 1224042 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640070755 |
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| Product | putative PQQ dehydrogenase protein |
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| Protein accession | YP_352636 |
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| Protein GI | 77463132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC TGAAGACGGG TCTCGTAGCG ACCCTATTGC TCTCGTCTGC GCCGGTCTTT
GCCAACGACT CGGTCCTCAA GGCGACCGAC GATCCGAAGC AGTGGGCGAT CCAGACCGGC
GACTATGCCA ACACCCGCTA TTCCGAGCTG AACCAGATCA CCCGCGAGAA CGTGGGCAAG
CTTCAGGTCG CCTGGACCTT CTCGACCGGC GTGCTGCGGG GCCACGAGGG CTCGCCCCTC
GTCGTGGACG GCATCATGTA TGTCCACACG CCCTTCCCGA ACAACGTCTA TGCGCTCGAT
CTGGCCAATG ACGGCAAGAT CCTGTGGCGC TACGAGCCGC AGCAGAACCC CGACGTCATC
GGCGTGATGT GCTGCGACAC GGTCAACCGC GGCGTGGCCT ATGCCGATGG CATGATCTTC
CTGCATCAGG CCGATACGAC CGTCGTGGCC CTCGACGCGA AGAGCGGCGA GGTGAAATGG
ACCGTGCAGA ACGGCGACCC GGCCAAGGGC GAGACCAACA CCGCGACCGT GCTGCCGGTC
AAGGACAAGC TCCTCGTCGG CATCTCGGGC GGCGAGTTCG GCGTGCGCGG CCATGTCACC
GCCTATGACA TGAAGACGGG CAAGCAGGTC TGGCGCGCCT ATTCCACCGG CCCCGACGCC
GAGATGCTGG TCGATCCGGA AAAGACCATG GTGCTCGGCA AGCCCGTGGG CGCCGACAGC
TCGATCAAGA GCTGGGAAGG CGACCAGTGG CAGATCGGCG GCGGCACCAC CTGGGGCTGG
TATTCCTACG ACCCCGACCT GAACCTCGTC TATTACGGCA CCGGCAACCC CTCGACCTGG
AACCCGTCGC AGCGTCCGGG CGACAACAAG TGGTCCATGA CCATCATGGC CCGCGATGCC
GATACCGGCA TGGCCAAGTG GATGTATCAG AAGACCCCGC ACGACGAGTG GGACTATGAC
GGGGTAAACG AGAACATCCT CGTCGATCAG GAGATCGACG GGCAGATGCG CAAGCTGCTG
GTGAACCTCG ACCGGAACGG CTTCGGCTAC ACGCTCGACC GCGAGACGGG CGAGCTTCTG
GTGGCGAAGA AATACGACCC GGCGGTGAAC TGGGCGACCG AAGTGGTGAT GGACAAGGAG
TCCGATCAAT ACGGCCGTCC GCAGGTGGTG GCGGAATATT CGACGGCGCA GAACGGCGAA
GACACCAACA CCACCGGCGT CTGCCCGGCC GCGCTCGGCT CCAAGGACCA GCAGCCCGCC
TCCTTCTCGC CCAAGACCGG CCTCGTCTAT GTGCCGACGA ACCACGTCTG CATGGACTAC
GAGCCCTACC GGGTCAGCTA CTCGGCCGGC CAGCCCTATG TCGGCGCCAC CCTCTCGATG
TATCCGGCGC CGAACAGCCA TGGCGGCATG GGCAATTTCA TCGCCTGGGA CGCGACGAAG
GGCGAGATCA AATGGTCGCT GCCCGAGCAG TTCTCGGTCT GGTCGGGGGC TCTGGCCACC
GCGGGTGACG TGGTGTTCTA CGGCACGCTC GAAGGCTATC TGAAGGCCGT CGATGCGGAG
ACGGGCGAGC TGCTCTATCG CTTCAAGACC CCGTCCGGCG TCATCGGCAA CGTGATGACC
TACGAGTTCA ACGGCAAGCA GTATGTGGGC GTGCTCTCGG GCGTCGGCGG CTGGGCGGGC
ATCGGCCTCG CCGCGGGCCT GACCAACCCC AACGAGGGTC TGGGCGCCGT GGGCGGCTAT
GCCGCGCTGT CGGACTATAC CCAGCTCGGC GGTCAGCTCA CCGTCTTTGC CCTGCCGGAC
TGA
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| Protein sequence | MKMLKTGLVA TLLLSSAPVF ANDSVLKATD DPKQWAIQTG DYANTRYSEL NQITRENVGK
LQVAWTFSTG VLRGHEGSPL VVDGIMYVHT PFPNNVYALD LANDGKILWR YEPQQNPDVI
GVMCCDTVNR GVAYADGMIF LHQADTTVVA LDAKSGEVKW TVQNGDPAKG ETNTATVLPV
KDKLLVGISG GEFGVRGHVT AYDMKTGKQV WRAYSTGPDA EMLVDPEKTM VLGKPVGADS
SIKSWEGDQW QIGGGTTWGW YSYDPDLNLV YYGTGNPSTW NPSQRPGDNK WSMTIMARDA
DTGMAKWMYQ KTPHDEWDYD GVNENILVDQ EIDGQMRKLL VNLDRNGFGY TLDRETGELL
VAKKYDPAVN WATEVVMDKE SDQYGRPQVV AEYSTAQNGE DTNTTGVCPA ALGSKDQQPA
SFSPKTGLVY VPTNHVCMDY EPYRVSYSAG QPYVGATLSM YPAPNSHGGM GNFIAWDATK
GEIKWSLPEQ FSVWSGALAT AGDVVFYGTL EGYLKAVDAE TGELLYRFKT PSGVIGNVMT
YEFNGKQYVG VLSGVGGWAG IGLAAGLTNP NEGLGAVGGY AALSDYTQLG GQLTVFALPD
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