| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2541 |
|---|
| Symbol | tatC |
|---|
| ID | 3720176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1184882 |
|---|
| End bp | 1185751 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640070720 |
|---|
| Product | twin-arginine translocation system protein, TatC |
|---|
| Protein accession | YP_352601 |
|---|
| Protein GI | 77463097 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCG ACAGCCGAGA CGACATCGAC AGTTCCAGTG CTCCGCTGAT CGAGCATCTG
GCAGAGTTGC GGAACCGGAT CCTGATCTCG CTCGCGGCCT TTCTGGTCGC TATGCTGGCG
TCGTTCACGG TCTGGAACCC GATCTTCAAC TTCCTCACCC ACCCGATCTG CGACGCGCTG
AACGCGCGGG GGCAGGACTG CTCGCTGATC CTCATCAAGC TGCAGGAAGG CTTCTTCGTG
GCCATCCGCA TCTCGGTGAT GGGGGGCATC ATCCTCTCCT TCCCGATCAT CGCATGGCAG
ATGTGGCGTT TCGTGGCGCC GGGGCTCTAC CGCAACGAAA AGGCGGCCTT CCTGCCGTTC
ATCGTCGCCT CGCCGCTCAT GTTCCTGCTG GGCGGCATCT TCGCCTTCTA CATCGTGCTG
CCCATCGCCT TCGACTTCTT CCTGGGCTTC CAGCAGTTCA TGACCGAGCA GCCGGGCGCT
GTGCGCGAAG ACGGCACGAT GCCGCTCGCA GGCGTGGTGT TCCAGGGGTC GATGGAGCAG
TATCTGGCGC TGACCACGAC CTTCATCCTG GCCTTCGGTC TCTGCTTCCA GCTTCCGGTC
CTGCTCACGC TGATGGGCAA GGCGGGGCTC GTGACGGCGC GGGGCCTCTC CTCGATGCGC
AAATATGCCA TCGTGCTGAT TCTGATCGTG GCGGCCTTCG CGACGCCGCC CGACATGATG
TCCCAGATGA TCCTCTTCGG CGCGGTCTAT CCGCTCTACG AGATCTCGAT CCTGCTCATC
CGCCGGATCG AGCGGAAGCG CGAGGCCGAG CTGCGGGCGC AGGGGCTGTG GTTCGAGGAC
GAGAACGAGG AAGAGGACGG CAAGGCATGA
|
|---|
| Protein sequence | MSLDSRDDID SSSAPLIEHL AELRNRILIS LAAFLVAMLA SFTVWNPIFN FLTHPICDAL
NARGQDCSLI LIKLQEGFFV AIRISVMGGI ILSFPIIAWQ MWRFVAPGLY RNEKAAFLPF
IVASPLMFLL GGIFAFYIVL PIAFDFFLGF QQFMTEQPGA VREDGTMPLA GVVFQGSMEQ
YLALTTTFIL AFGLCFQLPV LLTLMGKAGL VTARGLSSMR KYAIVLILIV AAFATPPDMM
SQMILFGAVY PLYEISILLI RRIERKREAE LRAQGLWFED ENEEEDGKA
|
|---|
| |