Gene RSP_2345 details

Gene Information

• Locus tag: RSP_2345
• Symbol: pdxH
• ID: 3719878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 970667
• End bp: 971269
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640070520
• Product: pyridoxamine 5'-phosphate oxidase
• Protein accession: YP_352402
• Protein GI: 77462898
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0259] Pyridoxamine-phosphate oxidase
• TIGRFAM ID: [TIGR00558] pyridoxamine-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGGA CGGGCATCTT CGCCGGGGAC GATCCCTTCG CCATCGCCGC AGGCTGGCTG 
GCCGAGGCCG AGCCGCAGGA GCCGAACGAT CCGAACGCCA TCGCGCTCGC GACCGTCGAT 
GCCGCGGGTC TGCCCAACGT GCGGATGGTG CTTCTCAAGG AGATCGAGGC CGAGGCTTTC 
GTCTTCTACA CCAATTACGG TTCGCAGAAG GCGGTCGAGA TCGAGACCTC GGGCAAGGCC 
GCCTTCGTGC TCCACTGGAA GTCGCTGCGC CGCCAGATCC GCGTCCGCGG CCTCGTCGAG 
CGCGAGGAGG GGGCGCAGGC CGACGCCTAC TACGCCTCGC GGTCGCTCAA GAGCCGGCTC 
GGGGCATGGG CCTCGGAGCA GAGCCGCCCG CTCGCCTCGC GCACCAGCCT TCTGGCCGAA 
GTGGCCCGCG TCACGGCACG CTTCGGAACC AACCCTCCGC GCCCCGCGTT CTGGGGTGGT 
TTCAGGATCA GGCCGCTCGA GATCGAGTTC TGGGCGGACG GCGCCTTCCG CCTGCACGAC 
CGTTTCCGCT GGCGCAGGAA CAGTCTGTCG GACGGTTGGT CGATCGAGCG GCTGAACCCG 
TGA 

 

Protein sequence

MDRTGIFAGD DPFAIAAGWL AEAEPQEPND PNAIALATVD AAGLPNVRMV LLKEIEAEAF 
VFYTNYGSQK AVEIETSGKA AFVLHWKSLR RQIRVRGLVE REEGAQADAY YASRSLKSRL 
GAWASEQSRP LASRTSLLAE VARVTARFGT NPPRPAFWGG FRIRPLEIEF WADGAFRLHD 
RFRWRRNSLS DGWSIERLNP