Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2254 |
Symbol | |
ID | 3719783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 870307 |
End bp | 872043 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640070426 |
Product | ABC efflux transporter, fused ATPase and inner membrane subunits |
Protein accession | YP_352309 |
Protein GI | 77462805 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC TGCGGGGCCT CGTGCCGTTC CTCGCGCCCT ACCGCAAGCT CACCTTCGGC GCGCTGGGCG CGCTCGTTCT CACCGCGATA ATCAGCCTGA TCCTGCCGGT GACGGTCCGG CGCGTGGTCG ACGGCTTCAT GGAGAACAAT GCGGCCCTGC TCGACCAGTA TTTCGCCGCC GCCCTCTTCA TTGCGGCCGC ACTCGCTGCA GGCACGGGGC TGCGCTACTA TCTCGTGACG CGGCTCGGCG AGCGGGTCGT GGCCGACATG CGCCGCGCGC TCTTCGACCG GATGATGGGC ATGAGCCCCG CCTTCTTCGA GCGGATCATG ACGGGCGAGG TGCTGTCGCG GCTCACGACC GACACGACGC TGCTTCTGTC GGTGATCGGC TCCTCGATCT CGGTGGCGCT GCGCAACCTC CTGATCCTGA TCGGCGGGCT GGTGCTTCTC CTGTTCACCT CGACCAAGCT CACTGGCCTC GTGATGCTGC TCGTGCCGCT CGTGGTGGTG CCGATCGTCA TCCTCGGCCG CAAGCTCCGC CGCCTCTCGC GCGAGAATCA GGACTGGATC GCCCAGAGTT CGGGCAATGC GTCCGAGGCG CTCCTGTCGG TGCAGACGGT GCAGGCCTTC ACCCACGAGC GCCAGTCGCG CGCCTTCTTC GGCGATGTGA CGGAGAAGTC CTTTCTGTCG GCCAAGGACC GGATCGGGAC GCGGGCGCTG ATGACGGTGA TCGTGATCTT CCTCGTCTTC ACCGGGATCG TGGGCGTGCT CTGGGTGGGC GCGCGCGATG TGCGCGCGGG CACCATGACG CCGGGCGAGA TGGTGCAGTT CCTCATCTAT GCGGTGATGG TGGCGGGCTC GGTCGGCGCG CTCTCCGAGA TCTGGAGCGA GCTGCAGCGG GCGGCGGGCG CGACCGAGCG GCTGAACGAG CTGCTGACGG CCGAGGATCC GGTGCAGGAT CCGGCCACGC CGGTGGCGCT GCCGCGGCCG GTGAAGGGCG AGATCAGCTT CGAGGGCGTG CGTTTCCGCT ATCCGGCGCG GCCCGAGGTC TCGGCGCTCG ACGGGATCGA TCTCGTCGTG CGGCCGGGCG AGACGGTGGC GCTTGTGGGG CCGTCGGGGG CGGGCAAGAC CACGATCCTC CAGCTGCTCC TGCGCTTCTA CGATCCCCAG CAGGGGGCCG TGCGCATCGA CGGGGTGGAT CTGCGCGACA TGACGCGCGA CGATTTCCGC CGTGCCATCG CCCTCGTGCC GCAGGATCCG GTGATCTTCG CCACCTCCGC GCGCGAGAAC ATCCGCTTCG GCCGTCCCGA GGCCACGGAT GCCGAGGTGG AGGCTGCGGC CCACGCCGCC GCCGCGCACG ATTTCCTGAG CCTCCTGCCG CAGGGCTACG ACACCTATGT GGGCGAGCGC GGCGTGATGC TCTCGGGCGG GCAGAAGCAG CGCGTGGCGC TGGCGCGGGC GATCCTGCGC GACGCGAAGA TCCTGCTCCT CGATGAGGCG ACCTCGGCAC TCGATGCCGA GAGCGAACGC GCCGTGCAGA CCGCGGTCGA GGCGCTGGCG CAGAACCGCA CGACGCTGGT GGTGGCCCAC AGGCTCGCCA CCGTGAAGCG CGCGGACCGG ATCGTCGTCT TCGACAAGGG CCGCATCGTG GCCACCGGCA CCCACGATGC GCTGGTGGCC GAGGGGGGGC TCTATGCCCG TCTCGCGCGG CTCCAGTTCA CCGACGGGTC GGTCTGA
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Protein sequence | MSALRGLVPF LAPYRKLTFG ALGALVLTAI ISLILPVTVR RVVDGFMENN AALLDQYFAA ALFIAAALAA GTGLRYYLVT RLGERVVADM RRALFDRMMG MSPAFFERIM TGEVLSRLTT DTTLLLSVIG SSISVALRNL LILIGGLVLL LFTSTKLTGL VMLLVPLVVV PIVILGRKLR RLSRENQDWI AQSSGNASEA LLSVQTVQAF THERQSRAFF GDVTEKSFLS AKDRIGTRAL MTVIVIFLVF TGIVGVLWVG ARDVRAGTMT PGEMVQFLIY AVMVAGSVGA LSEIWSELQR AAGATERLNE LLTAEDPVQD PATPVALPRP VKGEISFEGV RFRYPARPEV SALDGIDLVV RPGETVALVG PSGAGKTTIL QLLLRFYDPQ QGAVRIDGVD LRDMTRDDFR RAIALVPQDP VIFATSAREN IRFGRPEATD AEVEAAAHAA AAHDFLSLLP QGYDTYVGER GVMLSGGQKQ RVALARAILR DAKILLLDEA TSALDAESER AVQTAVEALA QNRTTLVVAH RLATVKRADR IVVFDKGRIV ATGTHDALVA EGGLYARLAR LQFTDGSV
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