| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2192 |
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| Symbol | mcmA |
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| ID | 3719665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 802132 |
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| End bp | 804261 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640070364 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_352248 |
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| Protein GI | 77462744 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.172259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG ATCTCGATGC GTGGCGCAAG CTCGCCGAGA AGGAGCTGAA GGGCAAGAGC
CCCGACAGCC TGACCTGGAA CACGCTGGAG GGCATTCCGG TCAAGCCGCT CTATACCAGG
GCCGATCTTG CGGGGATGGA GCATCTCGAC GGGCTGCCCG GGGTCGCGCC CTTCACCCGC
GGCGTGCGCG CCACGATGTA TGCGGGCCGC CCCTGGACGA TCCGGCAATA TGCGGGCTTC
TCGACCGCCG AGGCCTCGAA CGCCTTCTAC CGCAAGGCGC TGGCCGCGGG GCAGCAGGGC
GTCTCGGTGG CCTTCGACCT TGCGACCCAC CGCGGCTACG ACAGCGACCA TCCGCGCGTG
GTGGGCGACG TGGGCAAGGC GGGCGTGGCC ATCGACTCGA TCGAGGACAT GAAGATCCTG
TTCAACGGCA TCCCGCTCGA GAAGATCTCG GTCTCGATGA CGATGAACGG CGCGGTGATC
CCGATCCTCG CCAATTTCAT CGTGACCGGC GAGGAGCAGG GCGTGCCGCG GGCCGCGCTG
TCGGGCACGA TCCAGAACGA CATCCTCAAG GAGTTCATGG TCCGCAACAC CTACATCTAT
CCGCCCGAGC CCTCGATGCG GATCATTGCG GACATCATCG AATATACCTC GAAGGAGATG
CCGAAGTTCA ACTCGATCTC GATCTCCGGC TATCACATGC AGGAGGCGGG GGCGAACCTC
GTGCAGGAGC TGGCCTATAC GCTGGCCGAC GGGCGCGAAT ATGTCCGCGC GGCGCTGGCG
CGCGGCATGA ATGTGGACGA TTTCGCCGGG CGCCTCAGCT TCTTCTTCGC CATCGGCATG
AACTTCTTCA TGGAAGCCGC GAAGCTCCGC GCGGCGCGGC TTCTGTGGCA CCGGATCATG
TCCGAATTCG CGCCGAAGAA GCCCGGCAGC CTGATGCTGC GCACCCACTG CCAGACCTCG
GGCGTGAGCC TGCAGGAGCA GGACCCCTAC AACAACGTCA TCCGCACCGC TTACGAGGCG
ATGTCGGCGG CGCTCGGCGG CACCCAGTCG CTGCATACCA ACGCGCTCGA CGAGGCCATC
GCGCTGCCCA CCGAATTCTC GGCCCGGATC GCTCGGAACA CCCAGATCAT CCTGCAGGAA
GAGACGGGCG TGACCAGGGT CGTCGATCCG CTGGCGGGCT CCTACTATGT CGAAAGCCTG
ACCGCCGAGC TTGCGGAAAA GGCCTGGGCG CTCATCGAGG AGGTCGAGGC CATGGGCGGC
ATGACCAAGG CCGTGGCCTC GGGGATGCCG AAGCTCCGGA TCGAGGAATC GGCCGCCCGC
CGGCAGGCCG CCATCGACCG CGGCGAGGAT GTGATCGTCG GCGTGAACAA GTATCGGCTG
GCCAAGGAAG ATCCGATCGA GATCCTCGAC ATCGACAACG TGGCCGTCCG CGACGCGCAG
ATCGCGCGGC TGGAGAAGAT GCGCGCCACC CGTGACGAGG CCGCCTGCCA GGCGGCGCTC
GACGAACTGA CCCGCCGCGC CGCCGAGGGC GGCAACCTGC TCGAAGCCGC GGTGGATGCC
TCGCGCGCCC GCGCCTCTGT CGGAGAGATC AGCATGGCCA TGGAGAAGGT GTTCGGCCGC
CACCGTGCGG AAGTGAAGAC GCTCTCGGGT GTCTATGGCG CGGCCTACGA GGGCGACGAC
GGCTTCGCGC AGATCCAGCG CGACGTCGAG AGCTTCGCCG AGGAAGAGGG CCGCCGGCCC
CGGATGCTGG TGGTGAAGAT GGGGCAGGAC GGCCACGACC GCGGCGCCAA GGTGATCGCC
ACCGCCTTCG CCGACATCGG CTTCGACGTC GATGTGGGCA CCCTGTTCCA GACGCCCGAG
GAGGCGGCGC AGGACGCCAT CGACAATGAC GTCCATGTGG TGGGCATCTC CTCGCTGGCC
GCGGGCCACA AGACCCTCGC GCCGAAGCTG ATTGAGGCGC TGAAGGAGAA GGGCGCGGGC
GAGATCCTCG TGATCTGCGG CGGCGTGATC CCGCAGCAGG ATTACGACTT CCTGCAGCAG
GCGGGGGTGA AGGCCATCTT CGGCCCCGGT ACCAACATCC CCTCGGCGGC CAAGCACATC
CTCGACCTGA TCCGCGAGGC CCGCAGCTGA
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| Protein sequence | MTEDLDAWRK LAEKELKGKS PDSLTWNTLE GIPVKPLYTR ADLAGMEHLD GLPGVAPFTR
GVRATMYAGR PWTIRQYAGF STAEASNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV
VGDVGKAGVA IDSIEDMKIL FNGIPLEKIS VSMTMNGAVI PILANFIVTG EEQGVPRAAL
SGTIQNDILK EFMVRNTYIY PPEPSMRIIA DIIEYTSKEM PKFNSISISG YHMQEAGANL
VQELAYTLAD GREYVRAALA RGMNVDDFAG RLSFFFAIGM NFFMEAAKLR AARLLWHRIM
SEFAPKKPGS LMLRTHCQTS GVSLQEQDPY NNVIRTAYEA MSAALGGTQS LHTNALDEAI
ALPTEFSARI ARNTQIILQE ETGVTRVVDP LAGSYYVESL TAELAEKAWA LIEEVEAMGG
MTKAVASGMP KLRIEESAAR RQAAIDRGED VIVGVNKYRL AKEDPIEILD IDNVAVRDAQ
IARLEKMRAT RDEAACQAAL DELTRRAAEG GNLLEAAVDA SRARASVGEI SMAMEKVFGR
HRAEVKTLSG VYGAAYEGDD GFAQIQRDVE SFAEEEGRRP RMLVVKMGQD GHDRGAKVIA
TAFADIGFDV DVGTLFQTPE EAAQDAIDND VHVVGISSLA AGHKTLAPKL IEALKEKGAG
EILVICGGVI PQQDYDFLQQ AGVKAIFGPG TNIPSAAKHI LDLIREARS
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