| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2131 |
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| Symbol | rne |
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| ID | 3719601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 732464 |
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| End bp | 735274 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640070300 |
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| Product | RNAse E |
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| Protein accession | YP_352186 |
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| Protein GI | 77462682 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.162164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA AAATGCTTAT CGATGCCACC CACCCGGAGG AGACCCGGGT CGTGGTGGTG
GACGGAAACA AGGTCGAGGA GTTCGACTTC GAGACCGTCA ACAAGCGGCA GCTCGCCGGC
AACATCTATC TCGCCAAGGT AACGCGCGTC GAGCCGTCGC TGCAGGCGGC CTTCGTCGAT
TACGGCGGCA ACCGGCACGG CTTCCTCGCC TTCGCCGAGA TCCACCCCGA CTATTACCAG
ATCCCGGTCG CCGACCGTAA GGCGCTGCTC GAGGAAGAGC GGGCCTATGC GCGGGCGGAA
GATGACGAGG ACCACGGCCG CTCGCGCCGC CGGTCCCGCC CCGCTCCGGC CGCCGCGGCC
TCGGGCGATG CGGTCCAGTC CGGCGATGTG GCGGGCATGG ATGTCGTCGA TCTGGGCGAG
GAGACGGGTG CCGACGCGCT CTACGAGACC GATGGCTCCG ACGCGGGTGC CGCCGACAGC
GGCCAGCCCG AGGCGCCGGA TGCGGACGAA AAGCCCTACC GGGCGATGGA CCATGCCTCG
GATGGCGACG ACGAGATCGA ATCCGTGGCC GACGAGGATG TGGCCGAGGA GATCCCTGCG
CCCAGGAAGC CCCGCTCGCG CCGCTACAAG ATCCAGGAAG TCATCAAGGT GCGCCAGATC
ATGCTGGTGC AGGTCGTCAA GGAAGAGCGC GGCAACAAGG GCGCGGCGCT GACCACCTAT
CTCAGCCTCG CCGGGCGCTA CTGCGTGCTG ATGCCCAACA CCGCGCGCGG CGGCGGGATC
TCGCGCAAGA TCACCCAGGC CGCCGACCGC AAGAAGCTGA AGGAGATCGC CTCCGAGCTC
GAAGTGCCGG AAGGCGCGGG CCTCATCATC CGCACCGCCG GCGCCAAGCG CACCAAGCAG
GAGATCCGGC GCGACTACGA ATATCTCCTC CGCCTCTGGG AGCAGATCCG CGACCTCACT
CTGAAGTCGG TCGCGCCCGC GCCGATCTAC GAGGAGGGCG ACCTCATCAA GCGCACGATC
CGCGACCTCT TCAACCGCGA GATCGAGGAA GTGCTGGTCG AGGGCGAGAC GGGCTACCGC
ACCGCCAAGG ACTTCATGCG GATGATCATG CCGGCCCACG CCCGGCAGGT GATCCGCTAC
GATGAGCCGA TGCCGCTCTT CGCGCGCTAT CAGGTGGAAA GCTACCTCTC GGGCATGTTC
AACCCGGTGG TCCAGCTGAA ATCCGGCGGC TACATCGTCA TCGGTGTGAC CGAGGCGCTG
GTCGCCATCG ACGTGAACTC CGGCCGGGCC ACCAAGGAAG GCTCGATCGA GGAGACCGCG
CTCAAGACGA ACCTCGAGGC CGCCGAAGAG GTGGCGCGCC AGCTGCGGCT GCGCGACCTC
GCCGGTCTGA TCGTCATCGA CTTCATCGAC ATGGAAGAGC GCAAGAACAA CGCCGCCGTC
GAGAAGCGCC TGAAGGACAA GCTGAAGACC GACCGCGCCC GGATCCAAGT CGGCCGCATC
TCGGGCTTCG GCCTGATGGA GATGAGCCGC CAGCGCCTCC GTCCGGGAAT GCTCGAATCG
ACCACCCAGC CCTGCGCCCA CTGCCACGGC ACGGGTCTGA TCCGGTCGGA CGACAGCCTC
GCGCTTCAGG TCCTGCGCCA GCTCGAGGAA GAGGGCACCC GCAAGCGCTC GAAGGAAGTG
CTTCTTCGCG CACCGATTGC GGTTGTCAAC TTCCTGATGA ACAGCAAGCG CGAGCATATC
GCCATGATCG AGGCGCGCTA CGGCATGGCC GTGCGTGTCG AGGCCGATCC CTCGCTCTCG
AGCCCCGATT ATGTGATCGA GAAGTTCAAG ACCGCGACCC GTGTGGTGCC GGAAGCCGTG
AAGGTGATCT CGGGCAGCGC CGATCTGATG GGTGCGCCGG TGGACGAGCC CGAGGACGAC
TGGGTCGAGG AAGAGCCCGA GATCGTCGAG GAGGCCGAGG AGGTCGCGGA CGCGGCCGAG
GCGGCGCCCT CGGAGGGGCA GCCGAAGAAG AAGCGCCGTC GTCGGCGGCG GCGTCGGAAC
GGCGTGAACG GCGCCAACGG CTCCGACGCG CAGGAGAACG GCGACGAGGG CGACGAGTCG
GACGAGGATG AGGGCGATGC CGCCGACGAG CCGGAGGCCG TCGAAGCCGC CGCCGCCGTC
CCGGAGCTGG CGCCCGAGGC CGTCGTGAGC GCGCCCGAGC CGGCCGCGGC CGAGCCGGAG
CCGACCCCCG CCGATCCGGT GGCCGCACCG GCCGCCGAGG AGCCCGCGGC CCCGCGCAAG
CGCACCCGGA CGCGGAAGCC GAAGGTGACG GAGGAGGCTC CGGCCGAAGC CGCCGCGGAG
GCGCCCGCGG AGGCGCCCGC TGCTGAAGCG CCCGCCAAGG AGGCGAAGAA GCCGCGCACC
CGCACGAGCC GCAGCCGCAA GACGGCCGCC GCAGCCGAGG CCGTTCCCGC GGTCGAGGTG
GCCGTGACGG TCGACGAGAC GCCGGCGGAA GCCTCGCTTG AAATCGCCCG GACGACCGAG
GCGGCCCCGG AGACGACGCC GAGGCGCCCG CCGCCGAAGC CCCCGCCGCC GAAGCGCCTG
TGGCCGAAAC GCCTGCGCCG CAGCCCGAGC CGGTGGCCGA GGAGGCGGGC GAGGGCGAGG
ACAACAAGCC CAAGCGCCGC GGCTGGTGGT CGATCGGCCG CTGATCTCCA GAGATTGACA
CAGGGGCGCC TCCGGGCGCC CCTGTTCGTT CCCGCAGGAG CCGATGGGAG GCTCGCGCGG
TGGCCGACCG CCCGAGCAGG CGGGATTCCG GGGCTTCGCG ACCTGCGGTG A
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| Protein sequence | MAKKMLIDAT HPEETRVVVV DGNKVEEFDF ETVNKRQLAG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FAEIHPDYYQ IPVADRKALL EEERAYARAE DDEDHGRSRR RSRPAPAAAA
SGDAVQSGDV AGMDVVDLGE ETGADALYET DGSDAGAADS GQPEAPDADE KPYRAMDHAS
DGDDEIESVA DEDVAEEIPA PRKPRSRRYK IQEVIKVRQI MLVQVVKEER GNKGAALTTY
LSLAGRYCVL MPNTARGGGI SRKITQAADR KKLKEIASEL EVPEGAGLII RTAGAKRTKQ
EIRRDYEYLL RLWEQIRDLT LKSVAPAPIY EEGDLIKRTI RDLFNREIEE VLVEGETGYR
TAKDFMRMIM PAHARQVIRY DEPMPLFARY QVESYLSGMF NPVVQLKSGG YIVIGVTEAL
VAIDVNSGRA TKEGSIEETA LKTNLEAAEE VARQLRLRDL AGLIVIDFID MEERKNNAAV
EKRLKDKLKT DRARIQVGRI SGFGLMEMSR QRLRPGMLES TTQPCAHCHG TGLIRSDDSL
ALQVLRQLEE EGTRKRSKEV LLRAPIAVVN FLMNSKREHI AMIEARYGMA VRVEADPSLS
SPDYVIEKFK TATRVVPEAV KVISGSADLM GAPVDEPEDD WVEEEPEIVE EAEEVADAAE
AAPSEGQPKK KRRRRRRRRN GVNGANGSDA QENGDEGDES DEDEGDAADE PEAVEAAAAV
PELAPEAVVS APEPAAAEPE PTPADPVAAP AAEEPAAPRK RTRTRKPKVT EEAPAEAAAE
APAEAPAAEA PAKEAKKPRT RTSRSRKTAA AAEAVPAVEV AVTVDETPAE ASLEIARTTE
AAPETTPRRP PPKPPPPKRL WPKRLRRSPS RWPRRRARAR TTSPSAAAGG RSAADLQRLT
QGRLRAPLFV PAGADGRLAR WPTARAGGIP GLRDLR
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