Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2005 |
Symbol | ybaU |
ID | 3719338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 604158 |
End bp | 606023 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640070168 |
Product | peptidyl-prolyl cis-trans isomerse |
Protein accession | YP_352056 |
Protein GI | 77462552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAC TGACGTCGAT CGAGCACCAC AAGCCGAAGA AGAAGGGCAC GCAGCTCGTC TTCTGGGGCC TCGTCGGGCT GATGGCCGTG GGCCTCGGCG GCTTCGGCGT GACCAATTTC GGCGGCGGCC TCAGCACGGT CGGCAGCGTG GGCGACCGCG ACATCACCAC CGGGGCCTAT GCCCGCGCGC TCCAGCAGGA GATGCGGGCG CTCGGCGCGC AGATCAACCA GCCGGTCACG ATGGAGATGG CCAAGGCCTT CGGCCTCGAC CAGCAGGTGC GTCGCCGGCT CGTCACCGAG GCCGCGCTCT CGAACGAGGC CGACCGGATC GGCCTGTCGG TGGGCGACGC GCGCGTGGCG CGCGAGATCA CCGGCACGGA CGCCTTCCAC GGCCCCTCCG GCCAGTTCGA CCGCGAGACC TACCGGCTCG TGCTGCGCCA GAACAACCTC TCCGAGGGCG AGTTCGAGAC CGGCCTGCGC GAGGACATGG CGCGCTCTCT CCTGCAGGGC GCGGTGGGCG GCGGCTTCAT CGCCCCGGCC CAGATGGTGA ATACGCTCCA CGCCTATATC GCCGAGCGGC GGAGCTTCGG GCTGCTGCGC GTGACCGAGG CCAATCTGGC CAAGCCGCTG GCCGCACCGA CCGATGCCGA GCTTCAGGCC TGGTATGAGG CGCATCCGGC CGATTTCACC GCCCCCGAGA CGAAGCGGAT CACCTATGCC GCGCTGCTGC CGCAGGATGT GGCCGCGACC CTGCCCGCGG ACGAGGCGGC GCTGCGCCGG CTCTACGACG AGCGGCACGC CGAGTTCGTG CAGCCCGAGC GGCGGCTGGT CGAGCGGCTG GTCTTCCCCA CGGCCGAGGC CGCCGCGGAA GCGCGCAAGC GCCTCGATGC GGGCACCCCT TTCGAGACGC TCGTCTCCGA GCGCGGGCTG GAGCTCGCCG ACATCGACCT CGGCGATGCG TCGCGGGACG CTCTCGGCGG CGCGGCGGAC GCCGTCTTCG CCCTGACCGA GCCCGGCATC GCGGGGCCGG TCGAGACCGA CCTCGGCCCG GCGCTCTTCC GGGTGAACGG GGTGATCGCG GCGCATGAAA CGCCCTTCGA GGAGGTGCGC GACGATCTCC TGACGGAATA TCAGCAGGAA GCCGCAGGCC GCGCCATCGC GGGCCGCCGC GAGCAGATCG ACGACCTTCT GGCCGCAGGC GCCACGCTCG AGGATCTTGC CGGCGAGGCC GGCATGGAGA TCGCGACCGT CGATTACGCG CCGGGTCTCG ATTCCGACAT CGCGGGCTAC GAGGCCTTCC GCACGGCCGC CGACAAGCTG CAGAAGGACG ATTTCCCCGA GACGATCCTG CTGAACGACG GGGGCCTTCT GGCCATGCGG CTGGACGAGG TGGTGGCGCC GAAGCTGAAG CCCTTCGAGG AGGTGCGCGA CGATGTGGCC GAAGCGGCCC GCAAGGACGC CCTGACCAAA GCGCTGGCCG CCCGCGCGAC CGAGATCGCC AAGGCCGCCG AGGAGGGCAC CGACCTCGGC AGCTTCGGCC CGGTCGAGGA TCTGGGACCG ATGACCCGCG ACGGCTTCGT CGAGGGCGTG CCCGAGACGC TCGTGCCCGC CGCCTTCGAG ATGCAGCAGG GCGCCTTCCG CGCCATCGAG GGGGCGGACT TCGCCGGCGT CCTGCGGCTC GACGCGGTCG AACCCGCGGC GGCCGACGAC GAGGCGGCCC GGGCGCTCAA GGCCTCGCTC TCGGCGCAGA TCGAGCAGGC GCTGTCGCAG GATGCGCTCG CGCTCTTTTC CAACAGCCTG ATGCAGGAGG CCGGCATCAC GCTCAACGAC GCCGCCATCT CTGCGGTTCA GGCCCAGTTC CAGTAA
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Protein sequence | MSKLTSIEHH KPKKKGTQLV FWGLVGLMAV GLGGFGVTNF GGGLSTVGSV GDRDITTGAY ARALQQEMRA LGAQINQPVT MEMAKAFGLD QQVRRRLVTE AALSNEADRI GLSVGDARVA REITGTDAFH GPSGQFDRET YRLVLRQNNL SEGEFETGLR EDMARSLLQG AVGGGFIAPA QMVNTLHAYI AERRSFGLLR VTEANLAKPL AAPTDAELQA WYEAHPADFT APETKRITYA ALLPQDVAAT LPADEAALRR LYDERHAEFV QPERRLVERL VFPTAEAAAE ARKRLDAGTP FETLVSERGL ELADIDLGDA SRDALGGAAD AVFALTEPGI AGPVETDLGP ALFRVNGVIA AHETPFEEVR DDLLTEYQQE AAGRAIAGRR EQIDDLLAAG ATLEDLAGEA GMEIATVDYA PGLDSDIAGY EAFRTAADKL QKDDFPETIL LNDGGLLAMR LDEVVAPKLK PFEEVRDDVA EAARKDALTK ALAARATEIA KAAEEGTDLG SFGPVEDLGP MTRDGFVEGV PETLVPAAFE MQQGAFRAIE GADFAGVLRL DAVEPAAADD EAARALKASL SAQIEQALSQ DALALFSNSL MQEAGITLND AAISAVQAQF Q
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