Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1991 |
Symbol | |
ID | 3719324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 587720 |
End bp | 588865 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640070154 |
Product | putative ornithine decarboxylase |
Protein accession | YP_352042 |
Protein GI | 77462538 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.709374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTCT CGAAGACGAT CTGGACAAAC CCCGCCGAAT ATCTCCGTGC GCTCTCTCCC GAGGCGCCGG TGCTGTTCTT CTCGCCGTCG ACCCTGCAGG CGACGGCGCG GCGCTTCATC GACGGCTTTC CGGGCATGGT GACCTATGCG GTCAAGTCCA ACCCGGAAGA GGTGGTGATC GAGAACCTCG CCGCCGCGGG GATCCGCGGC TACGACGTGG CCTCGCCCCA CGAGATCCGC ATGATCCGCC GCATCGCGCC GGATGCGGCG CTGCACTACA ACAACCCCGT GCGCTCGCGC TCCGAGATCG GCGTGGGCGT CGAGATGGGC GTGAAGAGCT GGTCGGTCGA CTCGGCCTCG GAACTGGCCA AGCTCATCGA GCTCGTGCCC GCCGAGGGCT GCGAGATCGC GGTGCGCTTC AAGCTGGCGG TCTCGGGCGC GGCCTATAAC TTCGGGGCCA AGTTCGGCGC GACGGTCGAG CTCGCGGTCG AGCTGCTGCG CCGGGTGGCC GAGGCGGGCT TCATCCCGTC GATGACCTTC CACCCGGGTA CGCAATGCAC CGACCCCGCC GCGTGGGAAA CCTACATCCG CACTGCCGCC GAGATTGCGC GCGACGCCGG CGTGACCATC GCGCGGCTGA ACGTGGGCGG GGGCTTCCCC TCGCACCGGC TGAACGGGGT CGAACCCGAG CTCGAGGCCA TCTTCCACCT GATCGACCGC GTGACGGATG AGGCCTTCGG GGCCGACCGG CCGCTCCTCG TCTGCGAACC GGGCCGGGGC ATCTGCGCCG ACGCCTTCAC GCTTGCCGCG CGCATCAAGG CGGTGCGCGA CGACGCCCAT GTGTTCCTCA ACGACGGCGT CTACGGCTCG CTGACCGAGC TGCCGATGAT CGGCGTGATC GACCGCGTGG CGGTGCTGAC CCCCGAGGGC CGTCGGCGCG ACGGAGAGAC CCGCGACCGC ATCATCTTCG GGCCGACCTG CGACTCGGTG GACCGCCTTC CGGGCGAGCT GCCGCTTGCC GCGGATGTGG AGGAGGGCGA CTTTCTGGTG TTCCAGGGCA TGGGCGCCTA CTCCGCCGCC ACCAATACCC GCTTCAACGG CTTCGGCGAA CTGAGTATGG CCACCGTCCT CTCGCTCAAA TTGTAA
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Protein sequence | MGLSKTIWTN PAEYLRALSP EAPVLFFSPS TLQATARRFI DGFPGMVTYA VKSNPEEVVI ENLAAAGIRG YDVASPHEIR MIRRIAPDAA LHYNNPVRSR SEIGVGVEMG VKSWSVDSAS ELAKLIELVP AEGCEIAVRF KLAVSGAAYN FGAKFGATVE LAVELLRRVA EAGFIPSMTF HPGTQCTDPA AWETYIRTAA EIARDAGVTI ARLNVGGGFP SHRLNGVEPE LEAIFHLIDR VTDEAFGADR PLLVCEPGRG ICADAFTLAA RIKAVRDDAH VFLNDGVYGS LTELPMIGVI DRVAVLTPEG RRRDGETRDR IIFGPTCDSV DRLPGELPLA ADVEEGDFLV FQGMGAYSAA TNTRFNGFGE LSMATVLSLK L
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