Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1947 |
Symbol | cbbJ |
ID | 3719257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 545193 |
End bp | 545930 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640070110 |
Product | triosephosphate isomerase |
Protein accession | YP_351999 |
Protein GI | 77462495 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCAAAC TTGCGGCCGG AAACTGGAAG ATGAACGGAA CCGAGGCGGA TCTGGGCGAG ATCGACGCCC TGCTCGCCGC GCATCCGTCG CCCCGCTGCG AGATGCTGAT CTGTCCGCCC GCAACGCTTG TTGCGCGCAT GGCGGGACGC GCGGCGCAGG GCCTGATGGT CGGCGGGCAG GACTGCCACC CCAAGACCTC CGGCGCCCAT ACCGGCGACG TCTCGGCCGC CATGCTCGCC GATGCCGGGG CGAGCCACGT CATTCTCGGC CATTCCGAAC GCCGCGCCGA TCATGGCGAG ACGGACTCGC TCGTGCGGCT GAAGGCCGAA GCGGCCTGGG GCGCGGGCCT TGTCGCCATC GTCTGCGTGG GCGAAACCGA GGCCCAGCGC GACGCGGGCC AGACGCTCGA CGTGATCGGG GCACAGCTTG CGGGCTCGGT GCCGGAAGCC GCCACCGCGG CCAACACCGT GATCGCCTAC GAGCCGGTCT GGGCCATCGG CACCGGCCGC ACGCCCACGA CCGCCGAGAT CGCCGAGGTT CACGCCTTCC TCCGCGCGCG GCTCGCCGAG CGGTTTTCGG ATGCGGAGGG CTTCCGGCTG CTCTACGGCG GCTCGGTGAA GCCGTCGAAT GCGGCCGAGA TCTTCGCCGT GCCGAATGTC GATGGCGCGC TGGTCGGCGG CGCGAGCCTC AAGGCCGCGG ATTTCGGCGG GATCGTGGCG GCCCTTTCGG CCGCCTGA
|
Protein sequence | MRKLAAGNWK MNGTEADLGE IDALLAAHPS PRCEMLICPP ATLVARMAGR AAQGLMVGGQ DCHPKTSGAH TGDVSAAMLA DAGASHVILG HSERRADHGE TDSLVRLKAE AAWGAGLVAI VCVGETEAQR DAGQTLDVIG AQLAGSVPEA ATAANTVIAY EPVWAIGTGR TPTTAEIAEV HAFLRARLAE RFSDAEGFRL LYGGSVKPSN AAEIFAVPNV DGALVGGASL KAADFGGIVA ALSAA
|
| |