Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1909 |
Symbol | |
ID | 3719214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 506365 |
End bp | 507750 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640070067 |
Product | Outer membrane general secretion pathway protein, secretin |
Protein accession | YP_351957 |
Protein GI | 77462453 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGA AGGACATATT CCGGGCCGGG CTGGCGGTCC TCGCGCTCGC GGCGGGCATG GCGCTCACGC CCGCGGCGGC GCAGACCCTG CGCGTCATGG AGGGCTCGGC CTCGGGGGCG CTCAATGTGC CGATGAACCG CGCGGTCGTG GTGGAAAGTG ACCGGCCCTT CGCCGAGCTC TCCATCGCCA ATCCCGGCAT CGCCGACATC TCCACCCTGT CCGAGACCTC GATCTATGTC CTCGGCAAGG CGCCCGGCCG CACCACGCTC ACGCTTCTCG GGGCCGACGG GCGGCTGATC TCGAACGTGG ACGTGCATGT CACGCCCGAC GTGGCCGAGT TCAAGGAGCG GCTGCGCCAG ATCCTGCCCG GCGAGAATAT CGAAGTCCGC ACCGCCAACG ACGGGATCGT TCTGTCCGGC ACCGTCACCA GTACGGCCAA GCTTGATCGC GCGCTCGATC TCGCCAGCCG CTACGCGCCC GACCGCGTGT CCAACCTGAT GAGCGTCGGC GGCACGCAGC AGGTCATGCT GAAGGTCCGC TTCGCCGAGA TGCAGCGCTC GGTCGCCAAG AGCCTCGGCT CGTCGATCTA CGCCCGCAAT GGATCGGGCT CGGTGATCGG CGGCACGGGG ACGCTGCTGC AGAACGGCAT TCCGCCGTCG GGAGCTTCGA TCGCCACCTC AGGCAATGGC GCCCTGAGCC TCGGCTTCTC GGTCGGCGCG CTCGAGTTTC AGGTGCTGCT CGAGGCACTC GAATCGAAGG GGGTCGTGCG GACGCTGGCC GAGCCGAACC TCACCGCCCT CTCGGGGCAG GAGGCGAAGT TTCTCGCCGG CGGCGAATAT CCGATCCCGG TGGCCAGCGG CGACGAGAAG ATCTCGATCG AATACAAGCC CTTCGGCGTC GAGCTGAACT TCACCCCGGT CGTGGTGGAC GGCAACCAGA TCAACCTGAT GATCAATGCC GCCGTCTCCT CGATCGACAA TACCGTGACG CTGGAAAGTT CGGGCTTCAC CATCAACGCC TTCAAGCGGC GCGAGACCTC GACGACCGTC GAGATGCGCG ACGGCGAAAG CTTCGCCATC GCGGGCCTCC TGCAGGACGA CTTCCGCAAC CTCAACGGCC AGGTGCCGTG GCTGGGCGAC ATCCCGATCC TCGGCGCCCT CTTCCGCAGC GCCGAATACC AGCGCTCGCA GAGCGAGCTC GTCATCATCG TCACGCCGCA TCTCGTGACC CCCACCCGGG GCGAGGCGCT GGCGCTGCCC ACCGACCGGG TGAAACTGCC GTCCGAAAAG GATCTCTTCC TGTTCGGCCG CGTCACCGGC CGGGGGGCAG CGGCCGAAGT CGCCCGGCAG GATTTCAGCG GCTCCTACGG CTATGTGATG GAGTGA
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Protein sequence | MSTKDIFRAG LAVLALAAGM ALTPAAAQTL RVMEGSASGA LNVPMNRAVV VESDRPFAEL SIANPGIADI STLSETSIYV LGKAPGRTTL TLLGADGRLI SNVDVHVTPD VAEFKERLRQ ILPGENIEVR TANDGIVLSG TVTSTAKLDR ALDLASRYAP DRVSNLMSVG GTQQVMLKVR FAEMQRSVAK SLGSSIYARN GSGSVIGGTG TLLQNGIPPS GASIATSGNG ALSLGFSVGA LEFQVLLEAL ESKGVVRTLA EPNLTALSGQ EAKFLAGGEY PIPVASGDEK ISIEYKPFGV ELNFTPVVVD GNQINLMINA AVSSIDNTVT LESSGFTINA FKRRETSTTV EMRDGESFAI AGLLQDDFRN LNGQVPWLGD IPILGALFRS AEYQRSQSEL VIIVTPHLVT PTRGEALALP TDRVKLPSEK DLFLFGRVTG RGAAAEVARQ DFSGSYGYVM E
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