Gene RSP_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1854 
SymboltrkH3 
ID3719121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp448968 
End bp450422 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content67% 
IMG OID640070013 
Productpotassium uptake transporter, transmembrane component, TrkH 
Protein accessionYP_351904 
Protein GI77462400 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC CTCGCCCCGT CGGATATATC CTCGGTCTGC TCGTGGCCAC GCTGGGCGCG 
CTGATGCTGG TGCCGATGGC GCTCGATCTG GCCGCGGGCG ACCGGCACTG GCTCTCCTTC
GCCGAGACCG CGACCATCAC CACCGTCGCG GGCTCGATGC TCGCGCTCGC CTGCGCGAAC
GGGCGCGGGC AGGGCACGGG GCTCTCGCTG CAGCAGAGCT TCCTGCTCAC CACCGGGGCC
TGGGTCCTGC TGCCGGTGTT CGGCGCGCTG CCCTTCATGA TGGGGCGGCC GGACGCCAGC
TTCACCGATG CGGTGTTCGA GGCCATGTCC GGCTTCACCA CCACCGGCAC CACCGTCTTC
GTGGGGCTCG ATGCGCTGCC GCTCGGCACG AACCTCTGGC GCGGGATGCT GCAATGGCTG
GGCGGCCTCG GGATCGTCAT CGTGGCCATG ATCTTCCTGC CGGTGATGAA GGTGGGCGGG
ATGCAGTTCT TCCGCTCCGA GGGGTTCGAC ACGCTAGGCA AGATCCTGCC CCGCGCGCTC
GACATCTCGA CGGCGCTCAT CCAGATCTAC CTCGTGCTGA CCATGGCCTG CGTGATGACC
TTCCTCGCGC TCGGCATTCC GCTGTTCGAG GCCGTCGTCC ATGCGCTGAC CACCGTCTCG
ACCGGCGGCT TCTCCAGCTC GGACCGGTCG TTCGGCCTGT TCCAGGGGCC CGCCGAATAT
GCCTGCGCCT TCTTCATGGT GCTGGCCTCG CTGCCCTTCG TGCGCTTCGT CCAGCTGGCG
CAGGGCACCT TCCTGCCGCT CTGGCGCGAT CCGCAGGTGC GGGCCTACCT GCGCTGGAAC
GGCTATGCGA TTGGGCTGAT CGTGGCCTAC GAGGTGGTCA CGCGCAATGC GCCGGTCCTG
CCCACGCTGC GCGAGACGAC CTTCAACGTC ATCTCGACCT TTTCGGGCAC CGGCTTTTCC
AGCGTCGATC TCGGGCTCTG GGGCACCTTT CCCTTCGTCC TGCTGATCGT GGTGGGGCTG
ATCGGGGGCT GCACCTCCTC GACCGGCTGC TCGGTCAAGG TGTTCCGCTA CCTGATCCTG
CTCGAGGCGA TCAAGGTGCA GATCCGTCGC CTGCAAAGCC CGAGCGCGGT GATCTTCGTG
GATTACGAGG GCCGCCGCGT GGGCGAGGAT GTCATCAACT CGGTGATCCT CTTCTTCACC
ATGTTCATCC TGAGCTTCGG CGTGCTCGCG GTGCTCCTGT CGCTGACCGG GCTTCAGACC
AAGACGGCCA TCACCGCCGC CTGGACCGCC ATCGCGAACG TGGGCCCGGC CTTCGGGCCC
GAGGTGAGCG CGACCGGGGC CGTCGACCGC TTCCCGGCGG TGGCCAAATG GCTGATGATC
GGGGGCATGC TGGTCGGACG GCTGGAGCTT CTGTCGGTCT TCGTCCTCCT CACGCCCCGG
TTCTGGCGCA GCTGA
 
Protein sequence
MIDPRPVGYI LGLLVATLGA LMLVPMALDL AAGDRHWLSF AETATITTVA GSMLALACAN 
GRGQGTGLSL QQSFLLTTGA WVLLPVFGAL PFMMGRPDAS FTDAVFEAMS GFTTTGTTVF
VGLDALPLGT NLWRGMLQWL GGLGIVIVAM IFLPVMKVGG MQFFRSEGFD TLGKILPRAL
DISTALIQIY LVLTMACVMT FLALGIPLFE AVVHALTTVS TGGFSSSDRS FGLFQGPAEY
ACAFFMVLAS LPFVRFVQLA QGTFLPLWRD PQVRAYLRWN GYAIGLIVAY EVVTRNAPVL
PTLRETTFNV ISTFSGTGFS SVDLGLWGTF PFVLLIVVGL IGGCTSSTGC SVKVFRYLIL
LEAIKVQIRR LQSPSAVIFV DYEGRRVGED VINSVILFFT MFILSFGVLA VLLSLTGLQT
KTAITAAWTA IANVGPAFGP EVSATGAVDR FPAVAKWLMI GGMLVGRLEL LSVFVLLTPR
FWRS