Gene RSP_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1794 
Symbol 
ID3719039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp380074 
End bp380688 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID640069951 
Productputative lytic transglycosylase 
Protein accessionYP_351842 
Protein GI77462338 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.391793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGAT TGATCGGTGC ATTGGGCGCG GCGGTCGTGG GCTTGGGTCT TGCCTCGGGG 
CCGACCGCGG GTCTGGCCGA TGGGCTGAAG ATCCAGCGAT CCACGATGAA CCGGGCGGGA
ATCTTCAAGT CGCAGACGCG ACTTCTCGAC GGGCGCCTGT CGCAGCAGTA CGAAAGCTCC
ACCCGGCTGA AGCCGAAGGT CGAGAAGCTG GCGGCGGCTC TGCCGACGGC GCGCTACAAC
GGCCGCTACA AGGGCGAGTT CCTCGAATCG GCCAAGTCCG CGGCGCGCAA GCATGGCGTG
CCGGAGGATC TCTATCTCCG GCTCGTGCAG CAGGAATCGG GCTGGAACCC CGGCGCGGTC
TCGGTGAAGG GCGCCACGGG GCTGGCCCAG CTGATGCCGG GCACGGCGCA GCTTTTGCGG
GTGAACATCA ACGACCCGCA TCAGAATCTC GAGGGCGGGG CGCGGTACCT CAAGATGATG
TACAACAAGT TCGGCACCTG GCAGCTCGCG CTTGCCGCCT ACAATGCCGG GCCGCAGGCG
GTCGAGAAAC ATTCGGGCAT CCCGCCCTAC CGCGAGACGC AGAACTATGT GAAGGTCATC
TGGGGCAACG GCTGA
 
Protein sequence
MRRLIGALGA AVVGLGLASG PTAGLADGLK IQRSTMNRAG IFKSQTRLLD GRLSQQYESS 
TRLKPKVEKL AAALPTARYN GRYKGEFLES AKSAARKHGV PEDLYLRLVQ QESGWNPGAV
SVKGATGLAQ LMPGTAQLLR VNINDPHQNL EGGARYLKMM YNKFGTWQLA LAAYNAGPQA
VEKHSGIPPY RETQNYVKVI WGNG