Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1794 |
Symbol | |
ID | 3719039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 380074 |
End bp | 380688 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069951 |
Product | putative lytic transglycosylase |
Protein accession | YP_351842 |
Protein GI | 77462338 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.391793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGAT TGATCGGTGC ATTGGGCGCG GCGGTCGTGG GCTTGGGTCT TGCCTCGGGG CCGACCGCGG GTCTGGCCGA TGGGCTGAAG ATCCAGCGAT CCACGATGAA CCGGGCGGGA ATCTTCAAGT CGCAGACGCG ACTTCTCGAC GGGCGCCTGT CGCAGCAGTA CGAAAGCTCC ACCCGGCTGA AGCCGAAGGT CGAGAAGCTG GCGGCGGCTC TGCCGACGGC GCGCTACAAC GGCCGCTACA AGGGCGAGTT CCTCGAATCG GCCAAGTCCG CGGCGCGCAA GCATGGCGTG CCGGAGGATC TCTATCTCCG GCTCGTGCAG CAGGAATCGG GCTGGAACCC CGGCGCGGTC TCGGTGAAGG GCGCCACGGG GCTGGCCCAG CTGATGCCGG GCACGGCGCA GCTTTTGCGG GTGAACATCA ACGACCCGCA TCAGAATCTC GAGGGCGGGG CGCGGTACCT CAAGATGATG TACAACAAGT TCGGCACCTG GCAGCTCGCG CTTGCCGCCT ACAATGCCGG GCCGCAGGCG GTCGAGAAAC ATTCGGGCAT CCCGCCCTAC CGCGAGACGC AGAACTATGT GAAGGTCATC TGGGGCAACG GCTGA
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Protein sequence | MRRLIGALGA AVVGLGLASG PTAGLADGLK IQRSTMNRAG IFKSQTRLLD GRLSQQYESS TRLKPKVEKL AAALPTARYN GRYKGEFLES AKSAARKHGV PEDLYLRLVQ QESGWNPGAV SVKGATGLAQ LMPGTAQLLR VNINDPHQNL EGGARYLKMM YNKFGTWQLA LAAYNAGPQA VEKHSGIPPY RETQNYVKVI WGNG
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