| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1739 |
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| Symbol | rpoA |
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| ID | 3718945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 320724 |
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| End bp | 321740 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640069896 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_351787 |
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| Protein GI | 77462283 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.468874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACA AGAACTGGGC CGAGCTGATC AAGCCGACGC AGCTGGTCGT CAAGCCGGGT
GCCGATCCGG CCCGGGTCGC CACCGTGATT GCGGAGCCGC TCGAGCGCGG CTTCGGTCTG
ACGCTGGGCA ACGCGCTGCG CCGCGTGCTG CTCTCGTCGC TTCAGGGGGC CGCCATCACC
TCCGTCCAGA TCGACAACGT GCTGCACGAG TTCTCGTCGG TGGCCGGTGT CCGTGAGGAT
GTGACCGACA TCGTCCTGAA CCTGAAGGGC GTCTCGATCA AGATGGAGGT CGAGGGCCCT
AAGCGTCTGT CGATCTCCGC CAAAGGGCCG GGCGTCGTCA CCGCGGGCGA CATCTCGGAA
TCGAACGGCA TCGAGATCCT GAACAAGGAT CATGTCATCT GCCACCTCGA CGAGGGGGCG
GACGTGTTCA TGGAGCTGAC CGTGAACACC GGCAAGGGCT ATGTCGCGGC AGACAAGAAC
CGTCCCGAGG ATGCGCCGAT CGGCCTCATT CCGATCGACG CGATCTACTC GCCGGTGAAG
AAGGTGAGCT ACGAAGTCAC GCCGACCCGC GAGGGCCAGG TGCTCGACTA TGACAAGCTC
ACCATGCGGA TCGAAACCGA CGGCGGCCTG ACCCCGGACG ATGCGGTGGC CTATGCCGCG
CGCATCCTGC AGGATCAGCT GTCGATCTTC GTCAACTTCG AAGAGCCGGA ATCGGCCACC
CGCCACGACG TGGAGGATGG GCTCGAGTTC AACCCGCTGC TCCTCAAGAA GGTGGACGAG
CTCGAACTGT CGGTCCGCTC GGCGAACTGC CTCAAGAACG ACAATATCGT CTATATCGGC
GATCTCATCC AGAAGACCGA AGCCGAGATG CTCCGCACCC CGAACTTCGG CCGCAAGTCG
CTCAACGAGA TCAAGGAAGT GCTCTCGGGC ATGGGTCTGC ACCTCGGCAT GGATGTCGAG
GACTGGCCGC CGGAGAACAT CGAGGATCTG GCCAAGCGCT TCGAAGACCA GTTCTGA
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| Protein sequence | MIHKNWAELI KPTQLVVKPG ADPARVATVI AEPLERGFGL TLGNALRRVL LSSLQGAAIT
SVQIDNVLHE FSSVAGVRED VTDIVLNLKG VSIKMEVEGP KRLSISAKGP GVVTAGDISE
SNGIEILNKD HVICHLDEGA DVFMELTVNT GKGYVAADKN RPEDAPIGLI PIDAIYSPVK
KVSYEVTPTR EGQVLDYDKL TMRIETDGGL TPDDAVAYAA RILQDQLSIF VNFEEPESAT
RHDVEDGLEF NPLLLKKVDE LELSVRSANC LKNDNIVYIG DLIQKTEAEM LRTPNFGRKS
LNEIKEVLSG MGLHLGMDVE DWPPENIEDL AKRFEDQF
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