Gene RSP_1717 details

Gene Information

• Locus tag: RSP_1717
• Symbol: rplD
• ID: 3718922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 308776
• End bp: 309396
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640069873
• Product: 50S ribosomal protein L4
• Protein accession: YP_351764
• Protein GI: 77462260
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.27266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCTG AAGTCATCAA GCTGGACGCG AGCCCCGCTG GCTCGATTGA ACTCGACGAC 
GCGATCTTCG GTCTGGAGCC GCGCGCCGAC ATCCTGCACC GCGTCGTGCG CTGGCAGCGG 
GCGAAGGCCC AGGCCGGCAC GCACTCGGTG CTCGGCAAGT CGGACGTGAG CTACTCGACC 
AAGAAGATCT ATCGCCAGAA AGGCACCGGC GGCGCTCGCC ACGGGTCCAA GAAGGCGCCG 
ATCTTCCGTC ACGGTGGCGT CTACAAGGGC CCGACCCCGC GCAGCCACGC CCACGACCTG 
AACAAGAAGT TCCGGGCGCT CGGGCTGAAG CACGCGCTGT CGTCCAAGGC CACGACGGGC 
AACCTGATCG TGCTCGAGGA CATCGCGCTG GCCGAAGGCA AGACCGCGAT GCTCGCGAAA 
GCGGTGAAGG AACTCGGCTG GAAGCGCGTG CTCGTCATCG ACGGCGCTGA CATCAACGAG 
AACTTCGCCA AGGCCGCGCG CAACCTCGAA GGCGTGGACG TGCTGCCGTC GATCGGGGCG 
AACGTGTATG ACATCCTGAA GCGTGACACG CTCGTGATCA CGAAGGCGGG TGTCGAAGCT 
CTGGAGGCTC GTCTGAAATG A 

 

Protein sequence

MKAEVIKLDA SPAGSIELDD AIFGLEPRAD ILHRVVRWQR AKAQAGTHSV LGKSDVSYST 
KKIYRQKGTG GARHGSKKAP IFRHGGVYKG PTPRSHAHDL NKKFRALGLK HALSSKATTG 
NLIVLEDIAL AEGKTAMLAK AVKELGWKRV LVIDGADINE NFAKAARNLE GVDVLPSIGA 
NVYDILKRDT LVITKAGVEA LEARLK