Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1716 |
Symbol | rplC |
ID | 3718921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 308064 |
End bp | 308786 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069872 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_351763 |
Protein GI | 77462259 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0849831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTCTG GTGTAATCGC CAAGAAGCTG GGCATGACCC GGCTGTTCCT CGAGGACGGG AAACAGGTTC CCGTGACCGT CCTCCAACTC GACTCGCTTC AGGTCGTCGC GCAGCGCACG ACCGAGAAGG ACGGCTACAC CGCCGTTCAG CTCGGCGCGG GCGCGGCCAA GGCCAAGCGC GTGTCGGCGG CCCAGCGTGG CCACTTCGCG AAAGCGAACG TGGAGCCCAA GCGCAAGATC GCCGAATTCC GCGTGACGCC GGACTGCCTG ATCGATGTCG GCGCCGAGAT CACTGCTGAC CACTACTTTG CGGGTCAGTT CGTGGACATC GCCGGCACCT CGATCGGTAA GGGCTTTGCC GGTGCCATGA AGCGGCACAA CTTCGGCGGT CTGCGCGCCT CGCACGGCGT GTCGATCAGC CACCGCTCGC ACGGCTCCAC CGGCCAGTGC CAGGATCCCG GCAAGGTGTT CAAGGGCAAG AAGATGGCCG GCCACATGGG TGCTGCCCGT GTGACCACGC AGAACCTGCA GGTCGTGCGC ACCGACAGCG ACCGCGGCCT GATCATGGTG AAGGGCGCCG TTCCCGGTTC GAAGGGCGGC TGGGTCACCA TCAAGGACGC GGTGAAGAAG CCGGCGCCGG AACAAGCGAT CCGTCCGGCG GCGATCCGTG CCGCGGCGGT TGCCGAGGAA ACCTCCACCG GAGGCGAAAG CAATGAAGGC TGA
|
Protein sequence | MRSGVIAKKL GMTRLFLEDG KQVPVTVLQL DSLQVVAQRT TEKDGYTAVQ LGAGAAKAKR VSAAQRGHFA KANVEPKRKI AEFRVTPDCL IDVGAEITAD HYFAGQFVDI AGTSIGKGFA GAMKRHNFGG LRASHGVSIS HRSHGSTGQC QDPGKVFKGK KMAGHMGAAR VTTQNLQVVR TDSDRGLIMV KGAVPGSKGG WVTIKDAVKK PAPEQAIRPA AIRAAAVAEE TSTGGESNEG
|
| |