Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1613 |
Symbol | |
ID | 3718566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 211252 |
End bp | 212205 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069765 |
Product | TRAP dicarboxylate family transporter DctP subunit |
Protein accession | YP_351659 |
Protein GI | 77462155 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGCC GCACAACCCT GTCCGCGGCC GCGGCCGCTG CCGTGCTGAG CCTTCAGCCG CAAGTAGCCG CCGCGCAGGA ATTCATCAAC GTCCTGACCG GGGGCACCTC GGGCGTCTAC TATCCGCTGG GCGTGGGCCT GTCCGAAATC TATGCCGAGA ACATCGAAGG CGCGCGCACC CAGGTGCAGG CGACGAAGGC CTCGGTCGAG AACCTGAACC TGCTCGCGCA GCGCAAGGGC GAACTTGCCT TCGCCCTGGG CGATTCGGTG ACGCTCGCCT GGGAAGGCAA CGAGGAGGCG GGCTTCCCGC GCCCGCTGAA GAACCTGCGC GCCATCGCGG CCATCTATCC GAACTATATC CAGATCGTGG CCGACGCCGC CTCGGGTGTC ACGACGCTCG AGGATCTGAA GGGCAAGACG CTCTCGGTCG GCGCGCCCGC CTCGGGCACC GAGCTCAATG CCCGCGCCAT CTTCGGTGCG GCGGGCATGA GCTACGAGGA TCTCGCCAAG GTCGAATACC TGCCCTATGC GGAATCGGCC GAGCTCATCA AGAACCGGCA GCTGCAGGCG ACGCTGCAAT CCTCGGGTCT GGGCGTGGCC TTCATCAAGG ACCTCTCCTC GACCCACGAC ATCAACCTCG TGAGCATTCC GGCCGAGGTG GTCGAGAAGA TCGGCGCGCC CTATCAGCCC GCGGTGATCC CGGCCGGCAC CTATTCCGGG CAGGACACGG ACGTGCCCAC GGCGGCGGTG GGGAACCTTC TCGTGACGCA TGAGGATGTG AGCGAGGAAA CCGCCTATCA GATGACGAAG CTGATGTTCG AGAACCTCGA CCGGCTGAAG TCGGCCCATG CGGCGGCGGG CAACATCAAG CCCGAGACGG CCATCGAGGC GCTGCCGATC CCGCTGCATC CGGGCGCGGA GAAATACTAC CGCGAGATCG GTCTGATCCA GTAA
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Protein sequence | MFRRTTLSAA AAAAVLSLQP QVAAAQEFIN VLTGGTSGVY YPLGVGLSEI YAENIEGART QVQATKASVE NLNLLAQRKG ELAFALGDSV TLAWEGNEEA GFPRPLKNLR AIAAIYPNYI QIVADAASGV TTLEDLKGKT LSVGAPASGT ELNARAIFGA AGMSYEDLAK VEYLPYAESA ELIKNRQLQA TLQSSGLGVA FIKDLSSTHD INLVSIPAEV VEKIGAPYQP AVIPAGTYSG QDTDVPTAAV GNLLVTHEDV SEETAYQMTK LMFENLDRLK SAHAAAGNIK PETAIEALPI PLHPGAEKYY REIGLIQ
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