Gene RSP_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1481 
SymbolOppA 
ID3718717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp67142 
End bp68731 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content65% 
IMG OID640069629 
ProductABC oligopeptide transporter, perplasmic substrate-binding protein OppA 
Protein accessionYP_351524 
Protein GI77462020 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.869658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCT TCTCGCTCCG AGCCGGCGCC TGCGCGCTGG CGCTGATGGC CGGCACGGCA 
GGCATGGCCG CGGCTCAGGT GACCATCGTC CGCGGCAACG ACACCGACCC TGCGACGCTC
GACCATCACC TGACCTCGAC CGTCGCCGAG AGCAGGATCA TGAACGACCT CTACGAGGGG
CTCGTGGTGC AGGACGCGCA GGCGAAGGTC GTGCCCGGCG TGGCGGAAAG CTGGGAGATC
TCGGAGGACG GTCTCACCTA CACCTTCAAG CTCCGCGACG ATGCGAAGTG GTCGAACGGA
GATCCCGTCG TGGCCGAGGA TTTCGTCTTT GCCCTGCGGC GCATCATGAC CCCGGCGACG
GCGGCGGTCT ATGCCAACAT CCTCTACCCG ATCGCCAATG CGGAGGCCGT CGCCACCGGC
GCCAAGCAGC CCGAGGAGCT GGGCGTCGAG GCGGTGGACG CGCACACGCT GAAGTTCACC
CTGAACGCGC CCACGCCCTA TTTCCTCGAA CTCCTGACGC ACCAGTCCTC GCTGCCGATG
CACCGGGCGA CCGTCGAGGC GGAAGGGTCG AACTTCACCA AGCCCGGCGT GATGGTCACG
AACGGCGCCT ACAAGCTGGT CAGCTTCGTG CCCAACGACC GCATCGTGAT GGAGAAGAAC
GAGCATTTCC ACGATGCGGC CAATGTGGCC ATCGACCGCG TGGAATGGGT GCCCTTCGAG
GACCGCTCGG CCTGTCTGCG CCGCTTCGAG GCGGGCGAGG TGCAGATGTG CACCGACGTT
CCGGCCGAAC AGATGGCCTA CATGCGCGAG AACCTGAAGG ACGAGCTGCA TATCGCGCCC
TACCTCGGCA CCTACTACCT GCCGGTGAAG GGCGCCGACG GCAGCCCGCT GAAGGACAAG
CGGGTGCGGC AGGCGATCTC GATGGTGCTG GATCGTGACT TCATCGCCGA GGAGGTCTGG
CAGGAAACGA TGCTGCCCGG CTATTCGATG GTGCCTCCGG GCATCTCGAA CTATGTCGAG
ACCCCGCCCG CGCTCGACTA TGCCGACGAG GATCTGCTCG ACCGCGAGGA CAAGGCCAAG
GCGCTGCTCG AGGAAGCGGG CGTGGCCGAG GGCAGCCTCA CCGTGCAACT CTCCTACAAC
TCGTCCGAGA ACCACCGGAA CACGATGACG GCCATCGCCG ACATGCTGAA GAACATCGGC
ATCAACGCGA CGCTGAACGA GATGGAAGGC ACGAACTACT TCAACTACCT GAAGGAAGGC
GGCGCCTACG ACATCGTGCG CGCGGGCTGG ATCGGCGACT ATTCCGACCC GCAGAACTTC
CTGTTCCTGT TCGAGGGCGG CGTGCCCTTC AACTATCCGC GCTGGGAGAA TGCCGAATAC
GACGCGCTGA TGGACAAGGC GGCCGTCACG CAGGATCTCG GGCAGCGCGC GCAGATCATG
GCCGATGCCG AGACGATCCT GCTCGACGAG GTGCCGGCGA TCCCGCTGCT GACCTATTCC
TCGCGGGCGC TCGTGTCCGG CAAGGTGCAG GGCTACGCGG ACAACCTGCC CGACGTCCAC
CTCACCCGCT GGCTCTCGCT CGCCGAGTAA
 
Protein sequence
MTLFSLRAGA CALALMAGTA GMAAAQVTIV RGNDTDPATL DHHLTSTVAE SRIMNDLYEG 
LVVQDAQAKV VPGVAESWEI SEDGLTYTFK LRDDAKWSNG DPVVAEDFVF ALRRIMTPAT
AAVYANILYP IANAEAVATG AKQPEELGVE AVDAHTLKFT LNAPTPYFLE LLTHQSSLPM
HRATVEAEGS NFTKPGVMVT NGAYKLVSFV PNDRIVMEKN EHFHDAANVA IDRVEWVPFE
DRSACLRRFE AGEVQMCTDV PAEQMAYMRE NLKDELHIAP YLGTYYLPVK GADGSPLKDK
RVRQAISMVL DRDFIAEEVW QETMLPGYSM VPPGISNYVE TPPALDYADE DLLDREDKAK
ALLEEAGVAE GSLTVQLSYN SSENHRNTMT AIADMLKNIG INATLNEMEG TNYFNYLKEG
GAYDIVRAGW IGDYSDPQNF LFLFEGGVPF NYPRWENAEY DALMDKAAVT QDLGQRAQIM
ADAETILLDE VPAIPLLTYS SRALVSGKVQ GYADNLPDVH LTRWLSLAE